Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MTND5P5-201ENST00000503764 376 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 AC018710.1-201ENST00000506509 158 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 RNVU1-2-201ENST00000516326 135 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 Y_RNA.682-201ENST00000516457 100 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 RNU5F-4P-201ENST00000516581 114 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.28□□□□□ -2.2
CTDNEP1O95476 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.28□□□□□ -2.2
CTDNEP1O95476 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.28□□□□□ -2.2
CTDNEP1O95476 BNIP3P10-201ENST00000605360 577 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 AC124303.1-201ENST00000605703 360 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 SCARNA4-201ENST00000629045 128 ntBASIC1.28□□□□□ -2.2
CTDNEP1O95476 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTDNEP1O95476 SNORD31B-201ENST00000364977 69 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 Y_RNA.533-201ENST00000384596 114 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 FGF7P8-201ENST00000402994 292 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 AL603825.1-201ENST00000438481 80 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 AC004386.2-201ENST00000441858 148 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.27□□□□□ -2.21
CTDNEP1O95476 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.27□□□□□ -2.21
CTDNEP1O95476 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.27□□□□□ -2.21
CTDNEP1O95476 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.27□□□□□ -2.21
CTDNEP1O95476 MIR5696-201ENST00000578474 85 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.27□□□□□ -2.21
CTDNEP1O95476 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTDNEP1O95476 CBX3P1-201ENST00000325243 554 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 Y_RNA.48-201ENST00000362710 103 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 RNU6-23P-201ENST00000363283 107 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 Y_RNA.339-201ENST00000365325 102 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 MIR548K-201ENST00000408406 116 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 Y_RNA.595-201ENST00000410403 105 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 MTND3P8-201ENST00000412909 339 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 RPL30P13-201ENST00000418873 348 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 MTND1P2-201ENST00000430604 821 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 MTATP6P13-201ENST00000438531 667 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 MTND4LP16-201ENST00000440828 295 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 RPS23P5-201ENST00000495419 428 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 MIR4790-201ENST00000577799 79 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.26□□□□□ -2.21
CTDNEP1O95476 AC093913.1-201ENST00000614178 329 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 MIR6128-201ENST00000615528 109 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 AC005562.2-201ENST00000618264 111 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTDNEP1O95476 MTND5P9-201ENST00000503854 1755 ntBASIC1.26□□□□□ -2.21
CTDNEP1O95476 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CTDNEP1O95476 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CTDNEP1O95476 CASC19-280ENST00000642102 1351 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 Y_RNA.184-201ENST00000363884 108 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 RNU6-418P-201ENST00000384035 107 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 RNU6-1013P-201ENST00000384180 107 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 SNORA67.2-201ENST00000384300 149 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 MIR513A1-201ENST00000385138 129 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 SNORA48.1-201ENST00000390879 135 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 RNA5SP504-201ENST00000410676 117 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC243428.1-201ENST00000421099 264 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 AL445305.1-201ENST00000432577 575 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 SNORD5.1-201ENST00000458800 75 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 RNU1-131P-201ENST00000458943 161 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC026782.1-201ENST00000512952 449 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 ACA59.1-201ENST00000515966 143 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC080078.3-201ENST00000605407 463 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 AC122108.2-201ENST00000611946 526 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.25□□□□□ -2.21
CTDNEP1O95476 ZNF204P-201ENST00000416749 2397 ntBASIC1.25□□□□□ -2.21
CTDNEP1O95476 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.24□□□□□ -2.21
CTDNEP1O95476 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 Y_RNA.279-201ENST00000364763 95 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 Y_RNA.338-201ENST00000365320 114 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RNU6-438P-201ENST00000365561 103 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 Y_RNA.390-201ENST00000383932 102 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 MIR32-201ENST00000384965 70 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RNU6-510P-201ENST00000391239 108 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CTDNEP1O95476 MIR548F5-201ENST00000408421 86 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RNA5SP100-201ENST00000410903 110 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RNA5SP59-201ENST00000410922 110 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 PDCL2P1-201ENST00000419302 352 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 MTCO3P29-201ENST00000432119 779 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 AC099677.2-201ENST00000436385 175 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 RBMX2P4-201ENST00000441256 376 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 AC016717.1-201ENST00000448918 286 ntBASIC1.24□□□□□ -2.21
CTDNEP1O95476 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.24□□□□□ -2.21
CTDNEP1O95476 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms