Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNU6-1129P-201ENST00000515964 104 ntBASIC0.62□□□□□ -2.31
VAPBO95292 RNU6-344P-201ENST00000516635 111 ntBASIC0.62□□□□□ -2.31
VAPBO95292 MTND4P7-201ENST00000523876 130 ntBASIC0.62□□□□□ -2.31
VAPBO95292 MRPS36P4-201ENST00000534436 298 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC090049.2-201ENST00000550377 109 ntBASIC0.62□□□□□ -2.31
VAPBO95292 HIF1AP1-201ENST00000553642 175 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
VAPBO95292 FGF7P1-201ENST00000582820 288 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AC080078.2-201ENST00000603766 501 ntBASIC0.62□□□□□ -2.31
VAPBO95292 SNORA28-201ENST00000606769 126 ntBASIC0.62□□□□□ -2.31
VAPBO95292 SCARNA4-201ENST00000629045 128 ntBASIC0.62□□□□□ -2.31
VAPBO95292 AP000568.1-201ENST00000282964 442 ntBASIC0.61□□□□□ -2.31
VAPBO95292 RNA5SP219-201ENST00000390940 113 ntBASIC0.61□□□□□ -2.31
VAPBO95292 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.61□□□□□ -2.31
VAPBO95292 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.61□□□□□ -2.31
VAPBO95292 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.61□□□□□ -2.31
VAPBO95292 RNU7-125P-201ENST00000458760 62 ntBASIC0.61□□□□□ -2.31
VAPBO95292 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
VAPBO95292 MTND1P22-201ENST00000510572 951 ntBASIC0.61□□□□□ -2.31
VAPBO95292 RNU7-128P-201ENST00000517247 62 ntBASIC0.61□□□□□ -2.31
VAPBO95292 APOOP3-201ENST00000536787 586 ntBASIC0.61□□□□□ -2.31
VAPBO95292 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
VAPBO95292 RMST_3.1-201ENST00000611651 109 ntBASIC0.61□□□□□ -2.31
VAPBO95292 AC122133.1-201ENST00000613964 233 ntBASIC0.61□□□□□ -2.31
VAPBO95292 uc_338.34-201ENST00000617467 174 ntBASIC0.61□□□□□ -2.31
VAPBO95292 AC068700.1-201ENST00000565862 3754 ntBASIC0.6□□□□□ -2.31
VAPBO95292 ZNF204P-201ENST00000416749 2397 ntBASIC0.6□□□□□ -2.31
VAPBO95292 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
VAPBO95292 RNU6-1120P-201ENST00000362988 108 ntBASIC0.6□□□□□ -2.31
VAPBO95292 RNU6-553P-201ENST00000364047 96 ntBASIC0.6□□□□□ -2.31
VAPBO95292 Y_RNA.201-201ENST00000364052 96 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.6□□□□□ -2.31
VAPBO95292 RNU6-17P-201ENST00000384245 107 ntBASIC0.6□□□□□ -2.31
VAPBO95292 RNU6-18P-201ENST00000384527 107 ntBASIC0.6□□□□□ -2.31
VAPBO95292 MIR653-201ENST00000385279 96 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AL355796.1-201ENST00000406706 323 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
VAPBO95292 MTATP6P19-201ENST00000413797 659 ntBASIC0.6□□□□□ -2.31
VAPBO95292 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
VAPBO95292 CYCSP46-201ENST00000423569 204 ntBASIC0.6□□□□□ -2.31
VAPBO95292 STAG3L5P-204ENST00000443759 179 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.6□□□□□ -2.31
VAPBO95292 RNA5SP454-201ENST00000517231 127 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
VAPBO95292 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.6□□□□□ -2.31
VAPBO95292 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.6□□□□□ -2.31
VAPBO95292 MTATP6P3-201ENST00000581686 676 ntBASIC0.6□□□□□ -2.31
VAPBO95292 MIR4452-201ENST00000583004 71 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AC245884.10-201ENST00000597355 337 ntBASIC0.6□□□□□ -2.31
VAPBO95292 AC079248.2-201ENST00000623779 326 ntBASIC0.6□□□□□ -2.31
VAPBO95292 FER-210ENST00000628534 558 ntTSL 5 BASIC0.6□□□□□ -2.31
VAPBO95292 Y_RNA.238-201ENST00000364441 102 ntBASIC0.59□□□□□ -2.31
VAPBO95292 RNU6-1317P-201ENST00000364582 104 ntBASIC0.59□□□□□ -2.31
VAPBO95292 RNU4-12P-201ENST00000365233 139 ntBASIC0.59□□□□□ -2.31
VAPBO95292 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
VAPBO95292 RNU6-248P-201ENST00000410720 107 ntBASIC0.59□□□□□ -2.31
VAPBO95292 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPBO95292 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPBO95292 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPBO95292 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPBO95292 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.59□□□□□ -2.31
VAPBO95292 RNU7-63P-201ENST00000459054 62 ntBASIC0.59□□□□□ -2.31
VAPBO95292 RPS29P1-201ENST00000465274 159 ntBASIC0.59□□□□□ -2.31
VAPBO95292 AF186996.7-201ENST00000492781 209 ntBASIC0.59□□□□□ -2.31
VAPBO95292 SNORA14.1-201ENST00000516113 141 ntBASIC0.59□□□□□ -2.31
VAPBO95292 RNU7-99P-201ENST00000516271 62 ntBASIC0.59□□□□□ -2.31
VAPBO95292 AC087854.1-201ENST00000519706 414 ntBASIC0.59□□□□□ -2.31
VAPBO95292 MTND1P35-201ENST00000526739 508 ntBASIC0.59□□□□□ -2.31
VAPBO95292 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VAPBO95292 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VAPBO95292 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPBO95292 SNORD11B-201ENST00000607707 90 ntBASIC0.59□□□□□ -2.31
VAPBO95292 AC072046.2-201ENST00000618366 268 ntBASIC0.59□□□□□ -2.31
VAPBO95292 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.59□□□□□ -2.31
VAPBO95292 FGF7P2-201ENST00000332473 296 ntBASIC0.58□□□□□ -2.32
VAPBO95292 RNA5SP504-201ENST00000410676 117 ntBASIC0.58□□□□□ -2.32
VAPBO95292 FABP5P4-201ENST00000437203 171 ntBASIC0.58□□□□□ -2.32
VAPBO95292 RNU7-90P-201ENST00000459216 62 ntBASIC0.58□□□□□ -2.32
VAPBO95292 RNA5SP255-201ENST00000516370 107 ntBASIC0.58□□□□□ -2.32
VAPBO95292 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.58□□□□□ -2.32
VAPBO95292 AC104576.1-201ENST00000524225 88 ntBASIC0.58□□□□□ -2.32
VAPBO95292 AC234772.3-201ENST00000602277 528 ntBASIC0.58□□□□□ -2.32
VAPBO95292 AC064836.2-201ENST00000609491 462 ntBASIC0.58□□□□□ -2.32
VAPBO95292 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.58□□□□□ -2.32
VAPBO95292 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
VAPBO95292 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
VAPBO95292 RNY3P10-201ENST00000384764 102 ntBASIC0.57□□□□□ -2.32
VAPBO95292 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
VAPBO95292 AL606923.1-201ENST00000406616 190 ntBASIC0.57□□□□□ -2.32
VAPBO95292 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
VAPBO95292 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.57□□□□□ -2.32
VAPBO95292 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.57□□□□□ -2.32
VAPBO95292 MTATP6P18-201ENST00000417994 673 ntBASIC0.57□□□□□ -2.32
VAPBO95292 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.57□□□□□ -2.32
VAPBO95292 MTCO3P18-201ENST00000440206 761 ntBASIC0.57□□□□□ -2.32
VAPBO95292 RPEP5-201ENST00000441137 268 ntBASIC0.57□□□□□ -2.32
VAPBO95292 SNRPGP9-201ENST00000456025 225 ntBASIC0.57□□□□□ -2.32
VAPBO95292 RNU7-180P-201ENST00000459240 63 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms