Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 HMGB1P29-201ENST00000505659 499 ntBASIC0.87□□□□□ -2.27
SNX4O95219 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC090142.3-201ENST00000519012 385 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC136628.3-201ENST00000521868 290 ntBASIC0.87□□□□□ -2.27
SNX4O95219 MTND1P35-201ENST00000526739 508 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC007834.2-201ENST00000536310 343 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC087683.1-201ENST00000591187 441 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC022432.1-201ENST00000595739 310 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.87□□□□□ -2.27
SNX4O95219 SNORA28-201ENST00000606769 126 ntBASIC0.87□□□□□ -2.27
SNX4O95219 AC103705.1-201ENST00000619013 241 ntBASIC0.87□□□□□ -2.27
SNX4O95219 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
SNX4O95219 MIR96-201ENST00000362288 78 ntBASIC0.86□□□□□ -2.27
SNX4O95219 Y_RNA.124-201ENST00000363339 93 ntBASIC0.86□□□□□ -2.27
SNX4O95219 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
SNX4O95219 Y_RNA.226-201ENST00000364337 114 ntBASIC0.86□□□□□ -2.27
SNX4O95219 RNU1-93P-201ENST00000364704 169 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.86□□□□□ -2.27
SNX4O95219 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
SNX4O95219 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
SNX4O95219 RNU6-1186P-201ENST00000410429 97 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.86□□□□□ -2.27
SNX4O95219 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.86□□□□□ -2.27
SNX4O95219 BET1P1-201ENST00000482276 359 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AF186996.7-201ENST00000492781 209 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.86□□□□□ -2.27
SNX4O95219 CCDC34P1-201ENST00000507441 517 ntBASIC0.86□□□□□ -2.27
SNX4O95219 RNU6-322P-201ENST00000516010 103 ntBASIC0.86□□□□□ -2.27
SNX4O95219 RNU7-99P-201ENST00000516271 62 ntBASIC0.86□□□□□ -2.27
SNX4O95219 RNU1-117P-201ENST00000517041 158 ntBASIC0.86□□□□□ -2.27
SNX4O95219 MTCO2P4-201ENST00000517968 247 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AC060788.1-201ENST00000521318 469 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AC104576.1-201ENST00000524225 88 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AL590705.4-201ENST00000532209 134 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AL121579.1-201ENST00000555129 305 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.86□□□□□ -2.27
SNX4O95219 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
SNX4O95219 AL357312.1-201ENST00000603879 298 ntBASIC0.86□□□□□ -2.27
SNX4O95219 MIR8076-201ENST00000611401 83 ntBASIC0.86□□□□□ -2.27
SNX4O95219 AL603755.1-201ENST00000619504 163 ntBASIC0.86□□□□□ -2.27
SNX4O95219 ZNF204P-201ENST00000416749 2397 ntBASIC0.86□□□□□ -2.27
SNX4O95219 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SNX4O95219 RNU6-1266P-201ENST00000362794 105 ntBASIC0.85□□□□□ -2.27
SNX4O95219 RNU6-199P-201ENST00000362954 107 ntBASIC0.85□□□□□ -2.27
SNX4O95219 Y_RNA.159-201ENST00000363674 87 ntBASIC0.85□□□□□ -2.27
SNX4O95219 AC114482.1-201ENST00000418010 247 ntBASIC0.85□□□□□ -2.27
SNX4O95219 AL358934.1-201ENST00000432346 324 ntBASIC0.85□□□□□ -2.27
SNX4O95219 AC005002.2-201ENST00000438228 269 ntBASIC0.85□□□□□ -2.27
SNX4O95219 RPS4XP11-201ENST00000446897 772 ntBASIC0.85□□□□□ -2.27
SNX4O95219 TPTE2P5-203ENST00000458118 728 ntBASIC0.85□□□□□ -2.27
SNX4O95219 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
SNX4O95219 RNU6-430P-201ENST00000517078 107 ntBASIC0.85□□□□□ -2.27
SNX4O95219 AC090049.2-201ENST00000550377 109 ntBASIC0.85□□□□□ -2.27
SNX4O95219 MIR4452-201ENST00000583004 71 ntBASIC0.85□□□□□ -2.27
SNX4O95219 MIR4424-201ENST00000585257 86 ntBASIC0.85□□□□□ -2.27
SNX4O95219 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SNX4O95219 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.27
SNX4O95219 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
SNX4O95219 SNORD114-22-201ENST00000365423 72 ntBASIC0.84□□□□□ -2.27
SNX4O95219 RNU6-784P-201ENST00000384330 106 ntBASIC0.84□□□□□ -2.27
SNX4O95219 AL451046.2-201ENST00000403074 277 ntBASIC0.84□□□□□ -2.27
SNX4O95219 MIR1287-201ENST00000408492 90 ntBASIC0.84□□□□□ -2.27
SNX4O95219 RNA5SP247-201ENST00000411181 105 ntBASIC0.84□□□□□ -2.27
SNX4O95219 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX4O95219 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.84□□□□□ -2.27
SNX4O95219 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX4O95219 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX4O95219 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
SNX4O95219 NDUFB4P10-201ENST00000452541 359 ntBASIC0.84□□□□□ -2.27
SNX4O95219 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
SNX4O95219 RNU6-1198P-201ENST00000516904 67 ntBASIC0.84□□□□□ -2.27
SNX4O95219 AP001372.4-201ENST00000524889 472 ntBASIC0.84□□□□□ -2.27
SNX4O95219 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX4O95219 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX4O95219 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.84□□□□□ -2.27
SNX4O95219 Z94722.1-201ENST00000604328 474 ntBASIC0.84□□□□□ -2.27
SNX4O95219 AL354950.2-201ENST00000617939 290 ntBASIC0.84□□□□□ -2.27
SNX4O95219 U6.73-201ENST00000619194 103 ntBASIC0.84□□□□□ -2.27
SNX4O95219 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SNX4O95219 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.83□□□□□ -2.28
SNX4O95219 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.83□□□□□ -2.28
SNX4O95219 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.83□□□□□ -2.28
SNX4O95219 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.83□□□□□ -2.28
SNX4O95219 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.83□□□□□ -2.28
SNX4O95219 AL359672.1-201ENST00000442302 409 ntBASIC0.83□□□□□ -2.28
SNX4O95219 RN7SKP287-201ENST00000516546 266 ntBASIC0.83□□□□□ -2.28
SNX4O95219 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.83□□□□□ -2.28
SNX4O95219 AC093424.1-201ENST00000604999 338 ntBASIC0.83□□□□□ -2.28
SNX4O95219 AL357078.3-201ENST00000607528 618 ntBASIC0.83□□□□□ -2.28
SNX4O95219 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.83□□□□□ -2.28
SNX4O95219 RNU6-214P-201ENST00000384130 107 ntBASIC0.82□□□□□ -2.28
SNX4O95219 RNU6-933P-201ENST00000384424 107 ntBASIC0.82□□□□□ -2.28
SNX4O95219 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
SNX4O95219 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.82□□□□□ -2.28
SNX4O95219 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
SNX4O95219 RPS3AP1-201ENST00000413190 320 ntBASIC0.82□□□□□ -2.28
SNX4O95219 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.82□□□□□ -2.28
SNX4O95219 AL157687.1-201ENST00000554853 619 ntBASIC0.82□□□□□ -2.28
SNX4O95219 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.82□□□□□ -2.28
SNX4O95219 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms