Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX2-2O95096 AC074133.1-201ENST00000515696 183 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.05□□□□□ -2.08
NKX2-2O95096 AC007229.1-201ENST00000590455 412 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 U2.1-201ENST00000618978 145 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 MIR6852-201ENST00000621699 66 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 snoZ196.1-201ENST00000625269 89 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 MIR4272-201ENST00000635924 64 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.05□□□□□ -2.08
NKX2-2O95096 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.05□□□□□ -2.08
NKX2-2O95096 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX2-2O95096 RNY3P4-201ENST00000384428 101 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NKX2-2O95096 RNU11-3P-201ENST00000391111 133 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NKX2-2O95096 AC016717.1-201ENST00000448918 286 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 CHEK2P4-201ENST00000450340 246 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 RNU7-169P-201ENST00000459456 61 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 AC104435.1-201ENST00000483483 166 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-2O95096 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX2-2O95096 VN1R91P-201ENST00000594377 169 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 AL049779.4-201ENST00000604500 156 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX2-2O95096 AP006437.1-201ENST00000641440 3685 ntBASIC2.04□□□□□ -2.08
NKX2-2O95096 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-2O95096 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-2O95096 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-2O95096 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX2-2O95096 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-2O95096 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NKX2-2O95096 MIR369-201ENST00000362155 70 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 MIR1185-2-201ENST00000408687 86 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 RNU6-221P-201ENST00000459541 99 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX2-2O95096 Y_RNA.661-201ENST00000516003 99 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AC005786.1-201ENST00000588553 154 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
NKX2-2O95096 AC092447.9-201ENST00000603395 144 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AL357075.2-201ENST00000614906 189 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AL138825.1-201ENST00000618587 192 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AC022513.1-201ENST00000624512 117 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 IGHVIII-44-202ENST00000636235 289 ntBASIC2.03□□□□□ -2.08
NKX2-2O95096 AL159152.1-201ENST00000635019 2587 ntBASIC2.03□□□□□ -2.09
NKX2-2O95096 AC005336.3-201ENST00000623833 2679 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 ZNF720P1-201ENST00000562403 1939 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 MIR449A-201ENST00000362113 91 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 Y_RNA.11-201ENST00000362375 109 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 Y_RNA.39-201ENST00000362620 98 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 Y_RNA.394-201ENST00000383942 103 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 MIR628-201ENST00000385229 95 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 ELOCP21-201ENST00000412558 336 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 UQCRBP2-201ENST00000447827 297 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX2-2O95096 PCNPP5-201ENST00000452246 481 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX2-2O95096 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 RNU4-77P-201ENST00000516692 156 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AP005660.1-201ENST00000522972 293 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX2-2O95096 AL353149.1-201ENST00000610667 244 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AC013412.1-201ENST00000610687 192 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AL606534.2-204ENST00000635008 178 ntBASIC2.02□□□□□ -2.09
NKX2-2O95096 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NKX2-2O95096 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 MIR410-201ENST00000362222 80 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 Y_RNA.27-201ENST00000362540 103 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 RNU6-1264P-201ENST00000383891 107 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 RNY1P14-201ENST00000384426 108 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 SNORD12B-201ENST00000410433 91 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 RNU6-57P-201ENST00000411348 103 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AC060773.1-201ENST00000421698 310 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AC096644.2-201ENST00000429278 159 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX2-2O95096 UBE2DNL-203ENST00000474922 222 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AC107222.1-201ENST00000510899 637 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 SNORA40.9-201ENST00000515895 93 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 AC006600.1-201ENST00000572529 153 ntBASIC2.01□□□□□ -2.09
NKX2-2O95096 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX2-2O95096 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NKX2-2O95096 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
NKX2-2O95096 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
NKX2-2O95096 SNORA48.1-201ENST00000390879 135 ntBASIC2□□□□□ -2.09
NKX2-2O95096 MTCO3P19-201ENST00000415864 321 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AC008134.1-201ENST00000420943 193 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AC096920.1-201ENST00000423991 241 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
NKX2-2O95096 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2□□□□□ -2.09
NKX2-2O95096 IPO7P1-201ENST00000442031 636 ntBASIC2□□□□□ -2.09
NKX2-2O95096 ATP5J2P3-201ENST00000451550 258 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AC011406.1-201ENST00000512440 370 ntBASIC2□□□□□ -2.09
NKX2-2O95096 RNU6-475P-201ENST00000516073 104 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms