Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU6-845P-201ENST00000362578 103 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 Y_RNA.184-201ENST00000363884 108 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-593P-201ENST00000364716 112 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-596P-201ENST00000365395 98 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-842P-201ENST00000384269 107 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 MIR1283-1-201ENST00000408494 87 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RPL21P111-201ENST00000418453 477 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 AC243428.1-201ENST00000421099 264 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CSDE1O75534 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.69□□□□□ -2.14
CSDE1O75534 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.69□□□□□ -2.14
CSDE1O75534 SNORD5.1-201ENST00000458800 75 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU1-131P-201ENST00000458943 161 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 AC010531.2-201ENST00000465012 153 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU7-175P-201ENST00000515915 61 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RNU1-117P-201ENST00000517041 158 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 AL590705.4-201ENST00000532209 134 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 MIR5696-201ENST00000578474 85 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.69□□□□□ -2.14
CSDE1O75534 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 AC083806.3-201ENST00000614016 455 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.69□□□□□ -2.14
CSDE1O75534 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.69□□□□□ -2.14
CSDE1O75534 RNU6-1305P-201ENST00000364353 104 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 Y_RNA.279-201ENST00000364763 95 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 RNU6-418P-201ENST00000384035 107 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 Y_RNA.594-201ENST00000410373 140 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 NCOR1P3-201ENST00000420479 303 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 MTCO3P29-201ENST00000432119 779 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
CSDE1O75534 AC114982.1-201ENST00000469402 321 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 AC103851.1-201ENST00000506833 274 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 PRDX4P1-201ENST00000507189 574 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.68□□□□□ -2.14
CSDE1O75534 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSDE1O75534 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.68□□□□□ -2.14
CSDE1O75534 AC026782.1-201ENST00000512952 449 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 Y_RNA.708-201ENST00000516950 96 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 AC087441.2-201ENST00000529141 262 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 CBX3P8-201ENST00000532412 525 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 HSBP1P1-201ENST00000555205 166 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 PISRT1.1-201ENST00000616930 107 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.68□□□□□ -2.14
CSDE1O75534 AL159152.1-201ENST00000635019 2587 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CSDE1O75534 WWP1P1-201ENST00000466609 2769 ntBASIC1.68□□□□□ -2.14
CSDE1O75534 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
CSDE1O75534 MIR340-201ENST00000362125 95 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 RNU6-1050P-201ENST00000410388 107 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC004866.1-201ENST00000411748 78 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 USMG5P1-201ENST00000425964 177 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.67□□□□□ -2.14
CSDE1O75534 AC074290.1-201ENST00000448883 135 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC112492.4-201ENST00000456549 352 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
CSDE1O75534 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 SNORA25.14-201ENST00000516481 132 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 RNU6-58P-201ENST00000517143 103 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.67□□□□□ -2.14
CSDE1O75534 MIR3198-2-201ENST00000577868 80 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC005786.1-201ENST00000588553 154 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AC009229.3-201ENST00000608056 282 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
CSDE1O75534 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.67□□□□□ -2.14
CSDE1O75534 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.88-201ENST00000363029 99 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 RNU6-873P-201ENST00000363833 107 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 RNU6-595P-201ENST00000363944 107 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.405-201ENST00000383979 100 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.451-201ENST00000384200 100 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.482-201ENST00000384377 111 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.524-201ENST00000384564 100 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.561-201ENST00000384694 100 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 RPL23AP50-201ENST00000434149 455 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AL357134.1-201ENST00000445848 426 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AC097473.1-201ENST00000508142 408 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.670-201ENST00000516255 105 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.706-201ENST00000516933 99 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AC134698.4-201ENST00000523451 826 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AC027288.2-201ENST00000553028 243 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.66□□□□□ -2.14
CSDE1O75534 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AL078596.1-201ENST00000624856 447 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 AC099654.5-201ENST00000636479 350 ntBASIC1.66□□□□□ -2.14
CSDE1O75534 Y_RNA.166-201ENST00000363730 102 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 RNU6-245P-201ENST00000384020 107 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 RNU6-17P-201ENST00000384245 107 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 Y_RNA.490-201ENST00000384413 102 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 RNU6-18P-201ENST00000384527 107 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
CSDE1O75534 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.65□□□□□ -2.15
CSDE1O75534 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 257.6 ms