Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MT-TW-201ENST00000387382 68 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 MIR1252-201ENST00000408861 65 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 AL714022.1-201ENST00000439897 151 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1FO60840 RNA5SP82-201ENST00000516707 92 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 RNU6-897P-201ENST00000517135 105 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1FO60840 AC090517.1-201ENST00000569307 266 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.13□□□□□ -2.07
CACNA1FO60840 AL355598.1-201ENST00000604169 202 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 AC110491.1-201ENST00000562191 2010 ntBASIC2.13□□□□□ -2.07
CACNA1FO60840 U8.1-201ENST00000362843 134 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU6-17P-201ENST00000384245 107 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU6-18P-201ENST00000384527 107 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MRPL35P1-201ENST00000404272 572 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MTCO3P19-201ENST00000415864 321 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1FO60840 BPY2DP-201ENST00000422208 265 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AC011753.1-201ENST00000451001 220 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MRPL42P6-201ENST00000486397 371 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RPS27AP10-201ENST00000496103 208 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU7-4P-201ENST00000516961 62 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 UBL5P4-201ENST00000562584 236 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MIR3668-201ENST00000582138 75 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AL355297.3-201ENST00000604082 446 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RMST_6.1-201ENST00000611980 203 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1FO60840 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1FO60840 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 Y_RNA.64-201ENST00000362845 102 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 Y_RNA.307-201ENST00000365022 117 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU6-1222P-201ENST00000384615 107 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MIR10B-201ENST00000385011 110 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU6-121P-201ENST00000410525 99 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CACNA1FO60840 AC092423.1-201ENST00000430165 186 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.12□□□□□ -2.07
CACNA1FO60840 RNU7-87P-201ENST00000459343 62 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1FO60840 SNORA43.2-201ENST00000516652 128 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.12□□□□□ -2.07
CACNA1FO60840 AP004607.1-201ENST00000524456 203 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.12□□□□□ -2.07
CACNA1FO60840 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.12□□□□□ -2.07
CACNA1FO60840 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.12□□□□□ -2.07
CACNA1FO60840 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CACNA1FO60840 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CACNA1FO60840 RNU6-874P-201ENST00000362390 105 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 Y_RNA.14-201ENST00000362415 103 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 SNORD32A-201ENST00000364805 84 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.11□□□□□ -2.07
CACNA1FO60840 RPL23AP70-201ENST00000483361 460 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 RNU5F-8P-201ENST00000515941 111 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 RNY3P15-201ENST00000516297 97 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 MIR5188-201ENST00000583467 113 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 RAC1P9-201ENST00000604990 392 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 AC096772.1-201ENST00000609146 564 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 AL353997.5-201ENST00000618886 171 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 AC141273.2-201ENST00000618989 130 ntBASIC2.11□□□□□ -2.07
CACNA1FO60840 SNORD56.1-201ENST00000362913 68 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 SNORD50.1-201ENST00000362987 71 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.541-201ENST00000384640 113 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.551-201ENST00000384661 102 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.1□□□□□ -2.07
CACNA1FO60840 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.668-201ENST00000516233 93 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.680-201ENST00000516441 93 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 SNORA40.15-201ENST00000516884 107 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AK6P2-201ENST00000549020 471 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 NACAP3-201ENST00000552100 481 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 MIR8070-201ENST00000616510 88 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 MIR7111-201ENST00000619751 72 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.1□□□□□ -2.07
CACNA1FO60840 U6.92-201ENST00000636464 89 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.44-201ENST00000362676 108 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.106-201ENST00000363189 100 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 Y_RNA.143-201ENST00000363520 106 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 RNU6-622P-201ENST00000384272 103 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 SDAD1P3-201ENST00000427380 333 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.1□□□□□ -2.07
CACNA1FO60840 SNORD127-201ENST00000458892 86 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 RPL30P1-201ENST00000488676 339 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AC025465.3-201ENST00000510570 311 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 MRPS36P2-201ENST00000512569 299 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 RNU5F-2P-201ENST00000516066 82 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 LINC00933-203ENST00000559812 219 ntBASIC2.1□□□□□ -2.07
CACNA1FO60840 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1FO60840 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms