Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 AL033519.2-201ENST00000403958 392 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNA5SP504-201ENST00000410676 117 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNU2-32P-201ENST00000411193 191 ntBASIC2.6□□□□□ -1.99
SNX2O60749 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX2O60749 AC073910.1-201ENST00000445047 438 ntBASIC2.6□□□□□ -1.99
SNX2O60749 FCF1P4-201ENST00000448326 183 ntBASIC2.6□□□□□ -1.99
SNX2O60749 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.6□□□□□ -1.99
SNX2O60749 RPL26P26-201ENST00000480251 434 ntBASIC2.6□□□□□ -1.99
SNX2O60749 SNORA40.9-201ENST00000515895 93 ntBASIC2.6□□□□□ -1.99
SNX2O60749 SNORA4.4-201ENST00000515921 135 ntBASIC2.6□□□□□ -1.99
SNX2O60749 Y_RNA.683-201ENST00000516508 93 ntBASIC2.6□□□□□ -1.99
SNX2O60749 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
SNX2O60749 RNU7-193P-201ENST00000516723 65 ntBASIC2.6□□□□□ -1.99
SNX2O60749 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.6□□□□□ -1.99
SNX2O60749 AC022616.8-201ENST00000533569 253 ntBASIC2.6□□□□□ -1.99
SNX2O60749 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.6□□□□□ -1.99
SNX2O60749 MIR4529-201ENST00000578110 78 ntBASIC2.6□□□□□ -1.99
SNX2O60749 MIR4672-201ENST00000583126 81 ntBASIC2.6□□□□□ -1.99
SNX2O60749 AC010205.1-201ENST00000616668 449 ntBASIC2.6□□□□□ -1.99
SNX2O60749 MIR1248-201ENST00000629190 106 ntBASIC2.6□□□□□ -1.99
SNX2O60749 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.6□□□□□ -1.99
SNX2O60749 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
SNX2O60749 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
SNX2O60749 RNU6-961P-201ENST00000363893 105 ntBASIC2.59□□□□□ -1.99
SNX2O60749 Y_RNA.415-201ENST00000384012 112 ntBASIC2.59□□□□□ -1.99
SNX2O60749 RNU6-1109P-201ENST00000391187 107 ntBASIC2.59□□□□□ -1.99
SNX2O60749 MIR320B2-201ENST00000408479 138 ntBASIC2.59□□□□□ -1.99
SNX2O60749 RNU2-20P-201ENST00000410425 191 ntBASIC2.59□□□□□ -1.99
SNX2O60749 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.59□□□□□ -1.99
SNX2O60749 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
SNX2O60749 AC009237.7-201ENST00000447357 229 ntBASIC2.59□□□□□ -1.99
SNX2O60749 ATP5EP1-201ENST00000510257 156 ntBASIC2.59□□□□□ -1.99
SNX2O60749 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX2O60749 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
SNX2O60749 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.59□□□□□ -1.99
SNX2O60749 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX2O60749 MIR3162-201ENST00000581818 82 ntBASIC2.59□□□□□ -1.99
SNX2O60749 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.59□□□□□ -1.99
SNX2O60749 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SNX2O60749 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SNX2O60749 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.58□□□□□ -2
SNX2O60749 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.58□□□□□ -2
SNX2O60749 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNX2O60749 MIR449A-201ENST00000362113 91 ntBASIC2.58□□□□□ -2
SNX2O60749 Y_RNA.47-201ENST00000362697 108 ntBASIC2.58□□□□□ -2
SNX2O60749 Y_RNA.143-201ENST00000363520 106 ntBASIC2.58□□□□□ -2
SNX2O60749 Y_RNA.222-201ENST00000364264 102 ntBASIC2.58□□□□□ -2
SNX2O60749 SNORD87-201ENST00000364849 89 ntBASIC2.58□□□□□ -2
SNX2O60749 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU6-574P-201ENST00000384265 107 ntBASIC2.58□□□□□ -2
SNX2O60749 Y_RNA.595-201ENST00000410403 105 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
SNX2O60749 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SNX2O60749 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.58□□□□□ -2
SNX2O60749 AC245102.2-201ENST00000448956 180 ntBASIC2.58□□□□□ -2
SNX2O60749 PCNPP5-201ENST00000452246 481 ntBASIC2.58□□□□□ -2
SNX2O60749 AL137159.1-201ENST00000452808 512 ntBASIC2.58□□□□□ -2
SNX2O60749 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU6-408P-201ENST00000515910 100 ntBASIC2.58□□□□□ -2
SNX2O60749 RNY3P15-201ENST00000516297 97 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU5F-4P-201ENST00000516581 114 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
SNX2O60749 RNU6-667P-201ENST00000517186 102 ntBASIC2.58□□□□□ -2
SNX2O60749 SNORA31.25-201ENST00000517242 134 ntBASIC2.58□□□□□ -2
SNX2O60749 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.58□□□□□ -2
SNX2O60749 IGLV3-17-201ENST00000519099 244 ntBASIC2.58□□□□□ -2
SNX2O60749 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
SNX2O60749 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
SNX2O60749 AL031274.2-201ENST00000599419 203 ntBASIC2.58□□□□□ -2
SNX2O60749 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.58□□□□□ -2
SNX2O60749 RNU6-545P-201ENST00000362681 104 ntBASIC2.57□□□□□ -2
SNX2O60749 Y_RNA.64-201ENST00000362845 102 ntBASIC2.57□□□□□ -2
SNX2O60749 RNU6-770P-201ENST00000363929 105 ntBASIC2.57□□□□□ -2
SNX2O60749 RNU6-234P-201ENST00000365229 104 ntBASIC2.57□□□□□ -2
SNX2O60749 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
SNX2O60749 Y_RNA.439-201ENST00000384119 94 ntBASIC2.57□□□□□ -2
SNX2O60749 SNORA67.2-201ENST00000384300 149 ntBASIC2.57□□□□□ -2
SNX2O60749 Y_RNA.574-201ENST00000384766 95 ntBASIC2.57□□□□□ -2
SNX2O60749 RNU6-121P-201ENST00000410525 99 ntBASIC2.57□□□□□ -2
SNX2O60749 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
SNX2O60749 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.57□□□□□ -2
SNX2O60749 IPO7P1-201ENST00000442031 636 ntBASIC2.57□□□□□ -2
SNX2O60749 DYNLT3P2-201ENST00000442517 295 ntBASIC2.57□□□□□ -2
SNX2O60749 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.57□□□□□ -2
SNX2O60749 AC007395.1-201ENST00000451333 677 ntBASIC2.57□□□□□ -2
SNX2O60749 RPS23P5-201ENST00000495419 428 ntBASIC2.57□□□□□ -2
SNX2O60749 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.57□□□□□ -2
SNX2O60749 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.57□□□□□ -2
SNX2O60749 RNU6-344P-201ENST00000516635 111 ntBASIC2.57□□□□□ -2
SNX2O60749 AC121758.2-201ENST00000553271 193 ntBASIC2.57□□□□□ -2
SNX2O60749 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.57□□□□□ -2
SNX2O60749 PRR13P7-201ENST00000605538 430 ntBASIC2.57□□□□□ -2
SNX2O60749 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.57□□□□□ -2
SNX2O60749 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNX2O60749 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNX2O60749 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNX2O60749 Y_RNA.19-201ENST00000362462 99 ntBASIC2.56□□□□□ -2
SNX2O60749 Y_RNA.152-201ENST00000363578 100 ntBASIC2.56□□□□□ -2
SNX2O60749 RNU5F-3P-201ENST00000363767 117 ntBASIC2.56□□□□□ -2
SNX2O60749 RNU6-743P-201ENST00000364151 106 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms