Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC093303.1-201ENST00000514549 295 ntBASIC1.79□□□□□ -2.12
SNX3O60493 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
SNX3O60493 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.79□□□□□ -2.12
SNX3O60493 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.79□□□□□ -2.12
SNX3O60493 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.79□□□□□ -2.12
SNX3O60493 AC093023.1-201ENST00000547375 507 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AK6P2-201ENST00000549020 471 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC090617.3-201ENST00000573670 475 ntBASIC1.79□□□□□ -2.12
SNX3O60493 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.79□□□□□ -2.12
SNX3O60493 U2.15-201ENST00000611544 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC010999.1-201ENST00000611856 324 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.16-201ENST00000613119 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.12-201ENST00000613778 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.20-201ENST00000613956 192 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.9-201ENST00000615427 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.11-201ENST00000616345 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.2-201ENST00000616535 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.3-201ENST00000617785 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.19-201ENST00000618602 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 RNU2-1-201ENST00000618664 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.6-201ENST00000619225 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.5-201ENST00000619465 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U2.10-201ENST00000620268 191 ntBASIC1.79□□□□□ -2.12
SNX3O60493 U1.36-201ENST00000620684 176 ntBASIC1.79□□□□□ -2.12
SNX3O60493 AC112487.2-201ENST00000637950 304 ntBASIC1.79□□□□□ -2.12
SNX3O60493 Y_RNA.259-201ENST00000364619 101 ntBASIC1.78□□□□□ -2.12
SNX3O60493 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
SNX3O60493 Y_RNA.358-201ENST00000365491 99 ntBASIC1.78□□□□□ -2.12
SNX3O60493 Y_RNA.510-201ENST00000384511 114 ntBASIC1.78□□□□□ -2.12
SNX3O60493 SNORA8-201ENST00000384574 139 ntBASIC1.78□□□□□ -2.12
SNX3O60493 MIR548B-201ENST00000385247 97 ntBASIC1.78□□□□□ -2.12
SNX3O60493 RNY4P36-201ENST00000391116 96 ntBASIC1.78□□□□□ -2.12
SNX3O60493 MTCYBP4-201ENST00000401524 249 ntBASIC1.78□□□□□ -2.12
SNX3O60493 AL445646.1-201ENST00000431784 216 ntBASIC1.78□□□□□ -2.12
SNX3O60493 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
SNX3O60493 AC010095.1-201ENST00000443543 144 ntBASIC1.78□□□□□ -2.12
SNX3O60493 ATP5J2P3-201ENST00000451550 258 ntBASIC1.78□□□□□ -2.12
SNX3O60493 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.78□□□□□ -2.12
SNX3O60493 Y_RNA.632-201ENST00000459189 102 ntBASIC1.78□□□□□ -2.12
SNX3O60493 RNU6-1041P-201ENST00000516254 102 ntBASIC1.78□□□□□ -2.12
SNX3O60493 Y_RNA.718-201ENST00000517110 102 ntBASIC1.78□□□□□ -2.12
SNX3O60493 SUMO2P18-201ENST00000518873 252 ntBASIC1.78□□□□□ -2.12
SNX3O60493 AC093027.1-201ENST00000546698 429 ntBASIC1.78□□□□□ -2.12
SNX3O60493 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
SNX3O60493 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
SNX3O60493 AC125232.2-201ENST00000592457 143 ntBASIC1.78□□□□□ -2.12
SNX3O60493 AL773524.1-201ENST00000614065 229 ntBASIC1.78□□□□□ -2.12
SNX3O60493 Y_RNA.804-201ENST00000615262 101 ntBASIC1.78□□□□□ -2.12
SNX3O60493 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
SNX3O60493 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.78□□□□□ -2.12
SNX3O60493 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.13
SNX3O60493 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SNX3O60493 RNU5F-3P-201ENST00000363767 117 ntBASIC1.77□□□□□ -2.13
SNX3O60493 RNU6-1001P-201ENST00000411265 100 ntBASIC1.77□□□□□ -2.13
SNX3O60493 RNU6-57P-201ENST00000411348 103 ntBASIC1.77□□□□□ -2.13
SNX3O60493 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.77□□□□□ -2.13
SNX3O60493 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
SNX3O60493 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.77□□□□□ -2.13
SNX3O60493 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
SNX3O60493 AC074290.1-201ENST00000448883 135 ntBASIC1.77□□□□□ -2.13
SNX3O60493 RNU6-470P-201ENST00000515954 104 ntBASIC1.77□□□□□ -2.13
SNX3O60493 RNU6-264P-201ENST00000517134 104 ntBASIC1.77□□□□□ -2.13
SNX3O60493 SUB1P3-201ENST00000564581 315 ntBASIC1.77□□□□□ -2.13
SNX3O60493 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
SNX3O60493 SDR42E1P4-201ENST00000620894 481 ntBASIC1.77□□□□□ -2.13
SNX3O60493 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SNX3O60493 MTND5P35-201ENST00000557537 1720 ntBASIC1.77□□□□□ -2.13
SNX3O60493 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
SNX3O60493 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNX3O60493 RNU6-862P-201ENST00000362804 105 ntBASIC1.76□□□□□ -2.13
SNX3O60493 Y_RNA.67-201ENST00000362870 100 ntBASIC1.76□□□□□ -2.13
SNX3O60493 MIR329-1-201ENST00000385028 80 ntBASIC1.76□□□□□ -2.13
SNX3O60493 RNU6-1156P-201ENST00000410365 100 ntBASIC1.76□□□□□ -2.13
SNX3O60493 RNU4-53P-201ENST00000410828 140 ntBASIC1.76□□□□□ -2.13
SNX3O60493 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
SNX3O60493 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.76□□□□□ -2.13
SNX3O60493 AC244636.1-201ENST00000421152 228 ntBASIC1.76□□□□□ -2.13
SNX3O60493 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.76□□□□□ -2.13
SNX3O60493 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.76□□□□□ -2.13
SNX3O60493 ELOCP24-201ENST00000456370 334 ntBASIC1.76□□□□□ -2.13
SNX3O60493 AC011406.1-201ENST00000512440 370 ntBASIC1.76□□□□□ -2.13
SNX3O60493 Y_RNA.683-201ENST00000516508 93 ntBASIC1.76□□□□□ -2.13
SNX3O60493 MIR5094-201ENST00000578766 85 ntBASIC1.76□□□□□ -2.13
SNX3O60493 MIR4672-201ENST00000583126 81 ntBASIC1.76□□□□□ -2.13
SNX3O60493 AC084781.2-201ENST00000615568 161 ntBASIC1.76□□□□□ -2.13
SNX3O60493 AC006001.4-201ENST00000622243 395 ntBASIC1.76□□□□□ -2.13
SNX3O60493 MIR6873-201ENST00000622788 63 ntBASIC1.76□□□□□ -2.13
SNX3O60493 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
SNX3O60493 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNX3O60493 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SNX3O60493 RNA5SP361-201ENST00000362686 118 ntBASIC1.75□□□□□ -2.13
SNX3O60493 Y_RNA.58-201ENST00000362807 102 ntBASIC1.75□□□□□ -2.13
SNX3O60493 Y_RNA.154-201ENST00000363624 102 ntBASIC1.75□□□□□ -2.13
SNX3O60493 RNY3P1-201ENST00000365085 102 ntBASIC1.75□□□□□ -2.13
SNX3O60493 RNY3-201ENST00000365484 102 ntBASIC1.75□□□□□ -2.13
SNX3O60493 SNORA67.3-201ENST00000384366 140 ntBASIC1.75□□□□□ -2.13
SNX3O60493 Y_RNA.577-201ENST00000384794 101 ntBASIC1.75□□□□□ -2.13
SNX3O60493 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
SNX3O60493 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
SNX3O60493 YWHAEP4-201ENST00000505390 198 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms