Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SNORA5B-201ENST00000363786 132 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 Y_RNA.272-201ENST00000364696 102 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU6-1130P-201ENST00000365434 107 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 Y_RNA.415-201ENST00000384012 112 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU6-1081P-201ENST00000384537 107 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 SNORA1.3-201ENST00000384676 136 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 SNORA40.19-201ENST00000390846 128 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU6-1248P-201ENST00000391096 64 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU2-49P-201ENST00000410666 184 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.38□□□□□ -1.87
SRGAP3O43295 AC009963.1-201ENST00000417265 157 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.38□□□□□ -1.87
SRGAP3O43295 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 SNORA9.3-201ENST00000516383 129 ntBASIC3.38□□□□□ -1.87
SRGAP3O43295 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.38□□□□□ -1.87
SRGAP3O43295 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SRGAP3O43295 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRGAP3O43295 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SRGAP3O43295 Y_RNA.329-201ENST00000365209 107 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 MIR9-1-201ENST00000385198 89 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 RNU2-2P-201ENST00000410396 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 HMGN2P16-201ENST00000456802 261 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 RPL30P14-201ENST00000482744 348 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRGAP3O43295 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.37□□□□□ -1.87
SRGAP3O43295 MIR4319-201ENST00000577285 85 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 RNU2-4P-201ENST00000606190 192 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.15-201ENST00000611544 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.16-201ENST00000613119 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.12-201ENST00000613778 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.9-201ENST00000615427 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.11-201ENST00000616345 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.2-201ENST00000616535 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.3-201ENST00000617785 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.19-201ENST00000618602 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 RNU2-1-201ENST00000618664 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.6-201ENST00000619225 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.5-201ENST00000619465 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 U2.10-201ENST00000620268 191 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 MTND1P7-201ENST00000632801 297 ntBASIC3.37□□□□□ -1.87
SRGAP3O43295 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRGAP3O43295 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRGAP3O43295 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.37□□□□□ -1.87
SRGAP3O43295 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.37□□□□□ -1.87
SRGAP3O43295 Y_RNA.7-201ENST00000362352 102 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 RNU4-17P-201ENST00000365598 141 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 Y_RNA.441-201ENST00000384123 112 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 AC096649.2-201ENST00000416186 393 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 AC108938.1-201ENST00000451204 136 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 SNORD109B-201ENST00000458961 67 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 SNORD109A-201ENST00000459128 67 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 AC009127.3-201ENST00000570531 403 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 RPS15AP11-201ENST00000594193 385 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 AC002076.2-201ENST00000617362 122 ntBASIC3.36□□□□□ -1.87
SRGAP3O43295 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRGAP3O43295 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SRGAP3O43295 AL161431.1-201ENST00000618966 4205 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRGAP3O43295 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SRGAP3O43295 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
SRGAP3O43295 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SRGAP3O43295 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SRGAP3O43295 RNU6-748P-201ENST00000384648 107 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 MIR186-201ENST00000384988 86 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 MIR147B-201ENST00000390185 80 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 RNU2-52P-201ENST00000410680 190 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 AC023141.4-201ENST00000412031 328 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 CYCSP48-201ENST00000417124 323 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 AL441985.1-201ENST00000457727 251 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 RNU1-117P-201ENST00000517041 158 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 AP000867.2-201ENST00000532468 320 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.35□□□□□ -1.87
SRGAP3O43295 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 AC005520.5-201ENST00000613926 164 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 MIR6076-201ENST00000617521 113 ntBASIC3.35□□□□□ -1.87
SRGAP3O43295 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.35□□□□□ -1.87
SRGAP3O43295 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
SRGAP3O43295 AC062016.1-201ENST00000355719 319 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 Y_RNA.40-201ENST00000362645 93 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 Y_RNA.182-201ENST00000363880 111 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 Y_RNA.238-201ENST00000364441 102 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.87
SRGAP3O43295 RNU6-1264P-201ENST00000383891 107 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 Y_RNA.412-201ENST00000384001 104 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 AL590004.2-201ENST00000404787 371 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 AL139281.1-201ENST00000422120 335 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 AC027124.2-201ENST00000428249 105 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 RPL31P41-201ENST00000477967 372 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 RNA5SP76-201ENST00000516277 87 ntBASIC3.34□□□□□ -1.87
SRGAP3O43295 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.34□□□□□ -1.87
SRGAP3O43295 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.34□□□□□ -1.87
SRGAP3O43295 AC027176.1-201ENST00000560204 514 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms