Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
FOXN1O15353 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.09□□□□□ -1.91
FOXN1O15353 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
FOXN1O15353 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXN1O15353 RBBP8P1-201ENST00000449447 1844 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 RNA5SP295-201ENST00000362655 121 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 RNU6-1175P-201ENST00000365200 107 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 MIR10B-201ENST00000385011 110 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 RNU6-1001P-201ENST00000411265 100 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN1O15353 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXN1O15353 MIR5695-201ENST00000579717 85 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 MIR3605-201ENST00000583214 100 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXN1O15353 AC005828.6-201ENST00000606610 232 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 AC108706.1-201ENST00000611053 297 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 AC073349.3-201ENST00000617616 186 ntBASIC3.08□□□□□ -1.92
FOXN1O15353 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
FOXN1O15353 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXN1O15353 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXN1O15353 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 AL356292.1-201ENST00000283110 373 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Y_RNA.81-201ENST00000362997 102 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Y_RNA.136-201ENST00000363444 102 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNU6-741P-201ENST00000383889 107 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNU6-1027P-201ENST00000383998 107 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Y_RNA.435-201ENST00000384095 112 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 MIR329-1-201ENST00000385028 80 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNU6-1197P-201ENST00000391183 107 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 U3.37-201ENST00000408528 213 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNU2-51P-201ENST00000410708 197 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 EIF1AXP1-201ENST00000419267 435 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 SNRPEP9-201ENST00000436794 238 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 AC009237.8-201ENST00000445492 379 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 UQCRBP2-201ENST00000447827 297 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RPL30P5-201ENST00000494923 336 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RN7SL636P-201ENST00000497504 294 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 SNORA9.3-201ENST00000516383 129 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 RNA5SP291-201ENST00000517222 105 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 MIR8070-201ENST00000616510 88 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 AC006001.4-201ENST00000622243 395 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.07□□□□□ -1.92
FOXN1O15353 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXN1O15353 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN1O15353 Y_RNA.331-201ENST00000365267 102 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 RNU6-1130P-201ENST00000365434 107 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 RNU1-73P-201ENST00000383971 164 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 Y_RNA.441-201ENST00000384123 112 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 RNU6-1145P-201ENST00000384246 107 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 U8.10-201ENST00000384260 133 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 RNU6-22P-201ENST00000384355 107 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 SNORA64-201ENST00000384674 134 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 RNU5E-9P-201ENST00000411164 104 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 AC024067.1-201ENST00000426199 223 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 AL590383.1-201ENST00000428602 75 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 POLR2KP2-201ENST00000438155 177 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN1O15353 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN1O15353 snoU13.18-201ENST00000459483 104 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXN1O15353 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXN1O15353 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN1O15353 TRAV28-201ENST00000557548 323 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXN1O15353 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 SNORA43.4-201ENST00000629559 138 ntBASIC3.06□□□□□ -1.92
FOXN1O15353 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FOXN1O15353 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN1O15353 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
FOXN1O15353 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXN1O15353 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXN1O15353 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
FOXN1O15353 MIR26A1-201ENST00000362205 77 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU6-942P-201ENST00000363002 107 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU5B-2P-201ENST00000363036 113 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 Y_RNA.230-201ENST00000364348 109 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 Y_RNA.319-201ENST00000365138 92 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU6-959P-201ENST00000384671 107 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 SNORA46.1-201ENST00000391069 153 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU6-159P-201ENST00000391080 106 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 Y_RNA.597-201ENST00000410463 100 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU6-735P-201ENST00000410612 107 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 AC007395.1-201ENST00000451333 677 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 RNU6-1183P-201ENST00000517054 60 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 CUL1P1-201ENST00000509510 2425 ntBASIC3.05□□□□□ -1.92
FOXN1O15353 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXN1O15353 Y_RNA.217-201ENST00000364214 105 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms