Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ZNF971P-201ENST00000562068 1249 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 AC110760.3-201ENST00000598794 467 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 SNORA28-201ENST00000606769 126 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 AC008250.2-201ENST00000615261 205 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 MTND5P33-201ENST00000571250 1450 ntBASIC-0.65□□□□□ -2.51
CHD1O14646 snoZ40.1-201ENST00000364540 72 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 SMIM11P1-201ENST00000369586 178 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 MIR520G-201ENST00000385064 90 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 MIR520H-201ENST00000385126 88 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 MIR1283-1-201ENST00000408494 87 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.66□□□□□ -2.51
CHD1O14646 AC007547.1-201ENST00000462177 490 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 RNU6-977P-201ENST00000516411 103 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 DEFB131D-201ENST00000526803 184 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 AL391840.1-201ENST00000571144 367 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 MIR3612-201ENST00000579753 87 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 AC122133.1-201ENST00000613964 233 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.66□□□□□ -2.51
CHD1O14646 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 RMST_7.1-201ENST00000621935 268 ntBASIC-0.66□□□□□ -2.51
CHD1O14646 SNORA2B-201ENST00000384583 137 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.67□□□□□ -2.52
CHD1O14646 AL353997.1-201ENST00000432936 108 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AC026414.1-201ENST00000504046 698 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 RNU6-677P-201ENST00000516914 101 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 RNU1-117P-201ENST00000517041 158 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
CHD1O14646 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.67□□□□□ -2.52
CHD1O14646 RNU6-78P-201ENST00000362897 107 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 RNU5B-1-201ENST00000363286 116 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 MIR196A2-201ENST00000385189 110 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 MRPL42P3-201ENST00000401492 326 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 CDK8P2-201ENST00000415020 547 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 MTND4LP14-201ENST00000429447 288 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 RPL17P35-201ENST00000432217 549 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 HMGN2P26-201ENST00000463169 339 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AL163973.1-201ENST00000484753 577 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AC112206.4-201ENST00000515142 405 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 MIR4778-201ENST00000577635 80 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AC008752.3-201ENST00000588113 712 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 BCRP9-201ENST00000605312 388 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 AC103706.2-201ENST00000638080 240 ntBASIC-0.67□□□□□ -2.52
CHD1O14646 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.67□□□□□ -2.52
CHD1O14646 SNORA75B-201ENST00000384053 137 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 U6.112-201ENST00000384129 70 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 RNU6-57P-201ENST00000411348 103 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 TIMM9P3-201ENST00000428659 274 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.68□□□□□ -2.52
CHD1O14646 AC023632.1-201ENST00000518463 375 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 MTCO3P15-201ENST00000526563 574 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 AK6P2-201ENST00000549020 471 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 MIR4753-201ENST00000585119 83 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 RNU6-94P-201ENST00000607728 107 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.68□□□□□ -2.52
CHD1O14646 AL354696.1-201ENST00000614652 497 ntBASIC-0.68□□□□□ -2.52
CHD1O14646 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.68□□□□□ -2.52
CHD1O14646 RNU6-289P-201ENST00000364093 107 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 AL663109.1-201ENST00000411498 844 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 MTND1P17-201ENST00000448961 204 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 MIR4789-201ENST00000577469 82 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 VN1R87P-201ENST00000596706 487 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 MIR6755-201ENST00000619993 66 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 AL391099.1-201ENST00000624635 187 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
CHD1O14646 RNU6-481P-201ENST00000384194 107 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 DEFB131C-201ENST00000528817 165 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 AL359547.2-201ENST00000615810 418 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 AC026585.1-201ENST00000619582 524 ntBASIC-0.69□□□□□ -2.52
CHD1O14646 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.7□□□□□ -2.52
CHD1O14646 MIR548H2-201ENST00000408874 88 ntBASIC-0.7□□□□□ -2.52
CHD1O14646 SNORD83.1-201ENST00000411362 77 ntBASIC-0.7□□□□□ -2.52
CHD1O14646 AC079382.1-201ENST00000493346 557 ntBASIC-0.7□□□□□ -2.52
CHD1O14646 AC104073.3-201ENST00000610942 955 ntBASIC-0.7□□□□□ -2.52
CHD1O14646 RNU6-975P-201ENST00000384296 105 ntBASIC-0.71□□□□□ -2.52
CHD1O14646 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.71□□□□□ -2.52
CHD1O14646 RNU4-46P-201ENST00000410818 138 ntBASIC-0.71□□□□□ -2.52
CHD1O14646 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.71□□□□□ -2.52
CHD1O14646 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.71□□□□□ -2.52
CHD1O14646 RNU7-165P-201ENST00000458864 60 ntBASIC-0.71□□□□□ -2.52
CHD1O14646 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 RNU6-269P-201ENST00000391077 97 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 AP001328.1-201ENST00000528550 176 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 AC011921.3-201ENST00000605540 361 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 AC099654.8-201ENST00000637757 681 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 U6.108-201ENST00000637764 58 ntBASIC-0.72□□□□□ -2.52
CHD1O14646 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 U8.16-201ENST00000391279 133 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 MIR891A-201ENST00000401237 79 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 DEFB130D-201ENST00000426866 237 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 SNORD111.1-201ENST00000516421 86 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 MIR3912-201ENST00000577566 105 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 MIR5697-201ENST00000578045 78 ntBASIC-0.72□□□□□ -2.53
CHD1O14646 AC005520.5-201ENST00000613926 164 ntBASIC-0.72□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms