Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU6-280P-201ENST00000364145 104 ntBASIC1.81□□□□□ -2.12
RTCAO00442 RNU6-310P-201ENST00000384655 107 ntBASIC1.81□□□□□ -2.12
RTCAO00442 MT-TD-201ENST00000387419 68 ntBASIC1.81□□□□□ -2.12
RTCAO00442 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
RTCAO00442 MTCO1P44-201ENST00000441935 243 ntBASIC1.81□□□□□ -2.12
RTCAO00442 AC007395.1-201ENST00000451333 677 ntBASIC1.81□□□□□ -2.12
RTCAO00442 RPL17P19-201ENST00000489069 552 ntBASIC1.81□□□□□ -2.12
RTCAO00442 RNU6-559P-201ENST00000516151 98 ntBASIC1.81□□□□□ -2.12
RTCAO00442 SCARNA16.2-201ENST00000516520 172 ntBASIC1.81□□□□□ -2.12
RTCAO00442 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.81□□□□□ -2.12
RTCAO00442 AC025754.2-201ENST00000606491 432 ntBASIC1.81□□□□□ -2.12
RTCAO00442 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
RTCAO00442 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.81□□□□□ -2.12
RTCAO00442 AL590240.4-201ENST00000616908 390 ntBASIC1.81□□□□□ -2.12
RTCAO00442 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RTCAO00442 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RTCAO00442 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RTCAO00442 Y_RNA.384-201ENST00000383909 102 ntBASIC1.8□□□□□ -2.12
RTCAO00442 MIR487A-201ENST00000385009 80 ntBASIC1.8□□□□□ -2.12
RTCAO00442 MIR586-201ENST00000385035 97 ntBASIC1.8□□□□□ -2.12
RTCAO00442 MIR190B-201ENST00000401119 79 ntBASIC1.8□□□□□ -2.12
RTCAO00442 MIR1283-1-201ENST00000408494 87 ntBASIC1.8□□□□□ -2.12
RTCAO00442 Y_RNA.646-201ENST00000410980 101 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AC004866.1-201ENST00000411748 78 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AC092473.1-201ENST00000441098 221 ntBASIC1.8□□□□□ -2.12
RTCAO00442 NDUFB4P10-201ENST00000452541 359 ntBASIC1.8□□□□□ -2.12
RTCAO00442 MTCO3P8-201ENST00000453691 755 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.8□□□□□ -2.12
RTCAO00442 AC025465.3-201ENST00000510570 311 ntBASIC1.8□□□□□ -2.12
RTCAO00442 RNU6-1114P-201ENST00000516022 107 ntBASIC1.8□□□□□ -2.12
RTCAO00442 RNU6-507P-201ENST00000516045 100 ntBASIC1.8□□□□□ -2.12
RTCAO00442 Y_RNA.706-201ENST00000516933 99 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
RTCAO00442 FRG2DP-202ENST00000566967 323 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.8□□□□□ -2.12
RTCAO00442 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
RTCAO00442 MIR5006-201ENST00000583027 110 ntBASIC1.8□□□□□ -2.12
RTCAO00442 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.8□□□□□ -2.12
RTCAO00442 MIR1302-1-201ENST00000637932 143 ntBASIC1.8□□□□□ -2.12
RTCAO00442 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RTCAO00442 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.79□□□□□ -2.12
RTCAO00442 SNORD114-6-201ENST00000364393 72 ntBASIC1.79□□□□□ -2.12
RTCAO00442 Y_RNA.364-201ENST00000365532 101 ntBASIC1.79□□□□□ -2.12
RTCAO00442 RNU6-338P-201ENST00000383888 105 ntBASIC1.79□□□□□ -2.12
RTCAO00442 SNORD116-29-201ENST00000384516 83 ntBASIC1.79□□□□□ -2.12
RTCAO00442 RNU6-331P-201ENST00000384724 107 ntBASIC1.79□□□□□ -2.12
RTCAO00442 MIR10B-201ENST00000385011 110 ntBASIC1.79□□□□□ -2.12
RTCAO00442 RNU6-700P-201ENST00000391043 107 ntBASIC1.79□□□□□ -2.12
RTCAO00442 RNY4P36-201ENST00000391116 96 ntBASIC1.79□□□□□ -2.12
RTCAO00442 MTCO3P29-201ENST00000432119 779 ntBASIC1.79□□□□□ -2.12
RTCAO00442 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.79□□□□□ -2.12
RTCAO00442 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AC067942.3-201ENST00000512025 362 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.79□□□□□ -2.12
RTCAO00442 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.79□□□□□ -2.12
RTCAO00442 AC016925.2-201ENST00000605108 242 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AL355802.3-201ENST00000607571 545 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.79□□□□□ -2.12
RTCAO00442 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AC133104.2-201ENST00000615272 193 ntBASIC1.79□□□□□ -2.12
RTCAO00442 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTCAO00442 ZNF204P-201ENST00000416749 2397 ntBASIC1.79□□□□□ -2.12
RTCAO00442 AC092881.1-201ENST00000638218 2733 ntBASIC1.79□□□□□ -2.12
RTCAO00442 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RTCAO00442 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
RTCAO00442 Y_RNA.48-201ENST00000362710 103 ntBASIC1.78□□□□□ -2.12
RTCAO00442 RNU6-438P-201ENST00000365561 103 ntBASIC1.78□□□□□ -2.12
RTCAO00442 RNU6-1026P-201ENST00000384465 108 ntBASIC1.78□□□□□ -2.12
RTCAO00442 Y_RNA.529-201ENST00000384586 119 ntBASIC1.78□□□□□ -2.12
RTCAO00442 Y_RNA.577-201ENST00000384794 101 ntBASIC1.78□□□□□ -2.12
RTCAO00442 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RTCAO00442 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.78□□□□□ -2.12
RTCAO00442 MTND3P23-201ENST00000431980 347 ntBASIC1.78□□□□□ -2.12
RTCAO00442 Y_RNA.653-201ENST00000459091 95 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AP000870.1-201ENST00000472927 406 ntBASIC1.78□□□□□ -2.12
RTCAO00442 MTND3P22-201ENST00000510932 243 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AC093303.1-201ENST00000514549 295 ntBASIC1.78□□□□□ -2.12
RTCAO00442 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.78□□□□□ -2.12
RTCAO00442 RNU6-1213P-201ENST00000517075 94 ntBASIC1.78□□□□□ -2.12
RTCAO00442 Y_RNA.718-201ENST00000517110 102 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AC110588.1-201ENST00000559699 137 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AL355375.2-201ENST00000574825 175 ntBASIC1.78□□□□□ -2.12
RTCAO00442 MIR4422-201ENST00000581938 83 ntBASIC1.78□□□□□ -2.12
RTCAO00442 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AL117336.2-201ENST00000602435 335 ntBASIC1.78□□□□□ -2.12
RTCAO00442 AC080078.3-201ENST00000605407 463 ntBASIC1.78□□□□□ -2.12
RTCAO00442 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RTCAO00442 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
RTCAO00442 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.78□□□□□ -2.13
RTCAO00442 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.78□□□□□ -2.13
RTCAO00442 MIR126-201ENST00000362291 85 ntBASIC1.77□□□□□ -2.13
RTCAO00442 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
RTCAO00442 Y_RNA.106-201ENST00000363189 100 ntBASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-873P-201ENST00000363833 107 ntBASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-281P-201ENST00000384212 103 ntBASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-1235P-201ENST00000384559 107 ntBASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-541P-201ENST00000384709 110 ntBASIC1.77□□□□□ -2.13
RTCAO00442 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RTCAO00442 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.77□□□□□ -2.13
RTCAO00442 EIF1P2-201ENST00000428233 350 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms