Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
UPK1AO00322 RNU6-1103P-201ENST00000384150 107 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 RNY3P9-201ENST00000384727 106 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UPK1AO00322 AL049545.1-201ENST00000401856 572 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 RNU6-1186P-201ENST00000410429 97 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 MTCO2P19-201ENST00000427513 598 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AC245047.3-201ENST00000429428 127 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK1AO00322 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK1AO00322 AL606517.2-201ENST00000442855 241 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 MTCO1P29-201ENST00000496868 288 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.76□□□□□ -2.29
UPK1AO00322 LRRC34P1-201ENST00000542742 915 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK1AO00322 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK1AO00322 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK1AO00322 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK1AO00322 MIR4760-201ENST00000585040 80 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 MIR5692C1-201ENST00000585309 91 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AC087752.4-201ENST00000605911 462 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AC068700.1-201ENST00000565862 3754 ntBASIC0.76□□□□□ -2.29
UPK1AO00322 AL391516.1-201ENST00000554380 2449 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 RNU11-5P-201ENST00000391216 129 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AL034345.1-201ENST00000407768 123 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AL663109.1-201ENST00000411498 844 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AC016909.1-201ENST00000415916 166 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.75□□□□□ -2.29
UPK1AO00322 RNU6-221P-201ENST00000459541 99 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 Y_RNA.654-201ENST00000497848 106 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 RN7SKP298-201ENST00000515950 94 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 SNORA31.4-201ENST00000516049 129 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 RNA5SP54-201ENST00000516951 92 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.75□□□□□ -2.29
UPK1AO00322 AL021879.1-201ENST00000611756 288 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.75□□□□□ -2.29
UPK1AO00322 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 MIR8054-201ENST00000620877 86 ntBASIC0.75□□□□□ -2.29
UPK1AO00322 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-1266P-201ENST00000362794 105 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 Y_RNA.378-201ENST00000365652 113 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 SNORA67.2-201ENST00000384300 149 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-784P-201ENST00000384330 106 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-440P-201ENST00000390882 105 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 MRPL42P3-201ENST00000401492 326 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.74□□□□□ -2.29
UPK1AO00322 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-956P-201ENST00000458868 103 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 SRRM1P2-201ENST00000464531 1192 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 HMGB1P29-201ENST00000505659 499 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 SNORA40.12-201ENST00000516329 111 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 SNORA31.10-201ENST00000516482 106 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-1332P-201ENST00000516666 104 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 RNU6-165P-201ENST00000517170 99 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 RNA5SP454-201ENST00000517231 127 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 AL137100.2-201ENST00000555786 315 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
UPK1AO00322 MIR4661-201ENST00000582720 75 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 AC022217.4-201ENST00000604389 163 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.74□□□□□ -2.29
UPK1AO00322 AC023510.2-201ENST00000622162 746 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 AC106754.2-201ENST00000623006 233 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 SNORD3E-202ENST00000627253 216 ntBASIC0.74□□□□□ -2.29
UPK1AO00322 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
UPK1AO00322 MIR337-201ENST00000362281 93 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 RNU1-93P-201ENST00000364704 169 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.73□□□□□ -2.29
UPK1AO00322 RNU6-245P-201ENST00000384020 107 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AL353193.1-201ENST00000421444 268 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.73□□□□□ -2.29
UPK1AO00322 AC005002.2-201ENST00000438228 269 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 RPL23AP75-201ENST00000491601 451 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AC092436.3-201ENST00000511788 257 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 SNORA31.2-201ENST00000516019 134 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 RNU6-922P-201ENST00000516753 99 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK1AO00322 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.73□□□□□ -2.29
UPK1AO00322 AL118558.2-201ENST00000556294 238 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 MIR4781-201ENST00000585250 76 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AL513534.2-201ENST00000603836 250 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AC211469.2-201ENST00000605461 205 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 AL513423.1-201ENST00000621695 132 ntBASIC0.73□□□□□ -2.29
UPK1AO00322 RNU4-76P-201ENST00000364509 141 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 RNU6-38P-201ENST00000384085 107 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 MIR487A-201ENST00000385009 80 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 RNU6-910P-201ENST00000390844 107 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 MIR450B-201ENST00000401182 78 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 RNU4-55P-201ENST00000410731 137 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 MTND2P9-201ENST00000422293 931 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 RAB28P5-201ENST00000427490 651 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 MTCO2P16-201ENST00000436962 677 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 AL353572.1-201ENST00000442490 417 ntBASIC0.72□□□□□ -2.29
UPK1AO00322 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.72□□□□□ -2.29
UPK1AO00322 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.72□□□□□ -2.29
UPK1AO00322 AC092991.1-201ENST00000477176 376 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms