Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.490-201ENST00000384413 102 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 RNU6-174P-201ENST00000410406 106 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC188H7C350 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 RPL36AP21-201ENST00000490372 323 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 RNA5SP458-201ENST00000516188 119 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 AC027288.2-201ENST00000553028 243 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 AC022254.1-201ENST00000567857 235 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 MIR5696-201ENST00000578474 85 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 AC100812.1-201ENST00000607622 580 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 AC022513.1-201ENST00000624512 117 ntBASIC1.77□□□□□ -2.13
CCDC188H7C350 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC188H7C350 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC188H7C350 SNORD115-8-201ENST00000363856 82 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Y_RNA.238-201ENST00000364441 102 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Y_RNA.248-201ENST00000364501 109 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-593P-201ENST00000364716 112 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 SNORD115-38-201ENST00000365037 82 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-767P-201ENST00000384132 107 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-17P-201ENST00000384245 107 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Y_RNA.505-201ENST00000384489 102 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-18P-201ENST00000384527 107 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 MIR520A-201ENST00000384862 85 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-700P-201ENST00000391043 107 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC060773.1-201ENST00000421698 310 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 USP9YP16-201ENST00000430287 407 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 USP9YP23-201ENST00000455085 407 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC112492.4-201ENST00000456549 352 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 SNORD5.1-201ENST00000458800 75 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU7-87P-201ENST00000459343 62 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Y_RNA.673-201ENST00000516306 88 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RNA5SP384-201ENST00000516615 116 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Y_RNA.708-201ENST00000516950 96 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 CBX3P8-201ENST00000532412 525 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC188H7C350 SUB1P4-201ENST00000566062 339 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC188H7C350 AC018462.2-201ENST00000605375 395 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC126177.8-201ENST00000618339 1015 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC008873.1-201ENST00000625051 138 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
CCDC188H7C350 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC188H7C350 RNU6-1266P-201ENST00000362794 105 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU6-595P-201ENST00000363944 107 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 SNORD87-201ENST00000364849 89 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU6-439P-201ENST00000384188 106 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU6-793P-201ENST00000384233 104 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU6-842P-201ENST00000384269 107 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AC008134.1-201ENST00000420943 193 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AL353997.1-201ENST00000432936 108 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC188H7C350 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AP000870.1-201ENST00000472927 406 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU6-107P-201ENST00000516643 102 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 RNU7-30P-201ENST00000516835 62 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC188H7C350 AC011494.1-201ENST00000596454 237 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 AL355802.3-201ENST00000607571 545 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
CCDC188H7C350 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC188H7C350 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CCDC188H7C350 MTND4P12-201ENST00000498999 1377 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU1-62P-201ENST00000362599 164 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 snoU2-30.2-201ENST00000362805 70 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU6-137P-201ENST00000363680 108 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 Y_RNA.179-201ENST00000363844 90 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNA5SP99-201ENST00000364020 114 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU6-1019P-201ENST00000364424 107 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCDC188H7C350 MIR548K-201ENST00000408406 116 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 Y_RNA.594-201ENST00000410373 140 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNU6-1050P-201ENST00000410388 107 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 RNA5SP247-201ENST00000411181 105 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 MTND3P23-201ENST00000431980 347 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 AC099677.2-201ENST00000436385 175 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 AC069257.2-201ENST00000441819 155 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 FGF7P6-202ENST00000451282 293 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC188H7C350 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC188H7C350 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 AC009229.3-201ENST00000608056 282 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 uc_338.5-201ENST00000611839 155 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 AC122108.2-201ENST00000611946 526 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC188H7C350 AC010615.1-201ENST00000594254 1764 ntBASIC1.74□□□□□ -2.13
CCDC188H7C350 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms