Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 SNORD113-8-201ENST00000363497 74 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-418P-201ENST00000384035 107 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 SNORD14D-201ENST00000384390 87 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.570-201ENST00000384750 101 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 RNU4-30P-201ENST00000410245 143 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-121P-201ENST00000410525 99 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.602-201ENST00000410535 92 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 SRIP3-201ENST00000413200 219 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 RPL21P38-201ENST00000418090 167 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC123900.1-201ENST00000420390 96 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC025465.3-201ENST00000510570 311 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC055872.1-201ENST00000570978 278 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC026271.5-201ENST00000577873 130 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 MIR4435-1-201ENST00000582552 80 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 MIR4506-201ENST00000584693 77 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC011373.1-201ENST00000607270 237 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 AC004467.1-201ENST00000615678 330 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
MBD3L4A6NDZ8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.332-201ENST00000365271 113 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 RNU1-109P-201ENST00000383960 147 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 MIR568-201ENST00000385036 95 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 AL139095.1-201ENST00000404326 391 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 RNA5SP293-201ENST00000410527 113 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 AC139712.2-201ENST00000424302 339 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 AC010531.2-201ENST00000465012 153 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-570P-201ENST00000517051 105 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 7SK.10-201ENST00000621414 298 ntBASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD3L4A6NDZ8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 SNORD63-201ENST00000384262 68 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.461-201ENST00000384263 103 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RNU1-148P-201ENST00000384472 162 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-1235P-201ENST00000384559 107 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 MIR512-1-201ENST00000384913 84 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 SNORD115-46-201ENST00000390982 71 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RPL19P1-201ENST00000411635 428 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-498P-201ENST00000459468 107 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 AC098869.1-201ENST00000481627 292 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-948P-201ENST00000516374 107 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 AC245166.1-201ENST00000521012 253 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 MIR4423-201ENST00000580922 80 ntBASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
MBD3L4A6NDZ8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 MIR410-201ENST00000362222 80 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 RNU1-35P-201ENST00000362782 153 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 SNORD115-3-201ENST00000363100 82 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 U8.9-201ENST00000365667 134 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-574P-201ENST00000384265 107 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 SNORA26.7-201ENST00000391288 122 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-155P-201ENST00000516347 100 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 AC006380.1-201ENST00000603598 186 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 SNORD113-5-201ENST00000607261 78 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 MIR8062-201ENST00000621515 85 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 AC006001.4-201ENST00000622243 395 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.48□□□□□ -2.01
MBD3L4A6NDZ8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-1266P-201ENST00000362794 105 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-454P-201ENST00000364292 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms