Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 Y_RNA.500-201ENST00000384466 111 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 MIR518C-201ENST00000384822 101 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 COTL1P1-201ENST00000422309 375 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AL121890.1-201ENST00000435457 205 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AL121914.1-201ENST00000450188 156 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 SCARNA8-201ENST00000515924 131 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 RNU6-453P-201ENST00000516819 85 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 AC068647.2-201ENST00000637380 353 ntBASIC4.04□□□□□ -1.76
USP17L3A6NCW0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USP17L3A6NCW0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 MIR422A-201ENST00000362286 90 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 SNORD50B-201ENST00000364995 70 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 RNU4-11P-201ENST00000365287 132 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 SNORA20B-201ENST00000384220 132 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 MIR3074-201ENST00000384885 81 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 MIR513C-201ENST00000401352 84 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AL355796.1-201ENST00000406706 323 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 RPL30P13-201ENST00000418873 348 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AC010409.1-201ENST00000487382 476 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 RPL23AP94-201ENST00000512518 302 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AC109329.2-201ENST00000519658 482 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.76
USP17L3A6NCW0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP17L3A6NCW0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.03□□□□□ -1.77
USP17L3A6NCW0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 SNORA27.1-201ENST00000362604 124 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 Y_RNA.229-201ENST00000364347 113 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-1027P-201ENST00000383998 107 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-975P-201ENST00000384296 105 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-1154P-201ENST00000391001 104 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 MIR1289-1-201ENST00000408836 144 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-221P-201ENST00000459541 99 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RPS26P55-201ENST00000471178 356 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 UBE2DNL-203ENST00000474922 222 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 AC010598.1-201ENST00000510378 103 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU7-115P-201ENST00000516433 55 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-1337P-201ENST00000516525 95 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 RNU6-586P-201ENST00000517265 104 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP17L3A6NCW0 AC091564.4-201ENST00000533934 2194 ntBASIC4.02□□□□□ -1.77
USP17L3A6NCW0 Z82209.1-201ENST00000422141 2135 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC010332.2-201ENST00000613083 1904 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC009487.4-201ENST00000624969 3585 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 RNU6-199P-201ENST00000362954 107 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 RNU6-944P-201ENST00000364023 107 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 RNU6-818P-201ENST00000364837 108 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 U8.7-201ENST00000364940 136 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 SNORD31B-201ENST00000364977 69 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 SNORD6-201ENST00000365444 73 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 MIR15B-201ENST00000385045 98 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 SNORA40-201ENST00000388090 126 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 RNU6-1228P-201ENST00000391014 107 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 RNU6-257P-201ENST00000410238 98 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC006461.1-201ENST00000412637 326 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC117454.1-201ENST00000491120 168 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 VWA8P1-201ENST00000510889 176 ntBASIC4.01□□□□□ -1.77
USP17L3A6NCW0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP17L3A6NCW0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
USP17L3A6NCW0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP17L3A6NCW0 Y_RNA.172-201ENST00000363765 102 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 SNORA80A-201ENST00000363922 136 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP17L3A6NCW0 SNORD14D-201ENST00000384390 87 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 SNORA36B-201ENST00000410438 131 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 RNU6-57P-201ENST00000411348 103 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 AL357552.1-201ENST00000445254 415 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 AL137159.1-201ENST00000452808 512 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4□□□□□ -1.77
USP17L3A6NCW0 AC018630.3-201ENST00000542637 96 ntBASIC4□□□□□ -1.77
USP17L3A6NCW0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP17L3A6NCW0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP17L3A6NCW0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 606.2 ms