Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-510P-201ENST00000391239 108 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AL357139.1-201ENST00000407792 426 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-1050P-201ENST00000410388 107 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC138393.2-201ENST00000414742 246 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC060773.1-201ENST00000421698 310 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AL353997.1-201ENST00000432936 108 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AL353689.1-201ENST00000438895 199 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC016925.1-201ENST00000458303 298 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC007215.1-201ENST00000464893 276 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AP000870.1-201ENST00000472927 406 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AC114801.2-201ENST00000503825 781 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 ACA59.1-201ENST00000515966 143 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-567P-201ENST00000516746 107 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RNU1-117P-201ENST00000517041 158 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RRN3P3-201ENST00000549207 578 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 MIR4299-201ENST00000577899 72 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 AL355802.3-201ENST00000607571 545 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 RMST_6.1-201ENST00000611980 203 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.18□□□□□ -2.22
TRAV40A0A0B4J280 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-873P-201ENST00000363833 107 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-595P-201ENST00000363944 107 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-438P-201ENST00000365561 103 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-439P-201ENST00000384188 106 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 MIR676-201ENST00000390702 67 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AL356432.1-201ENST00000405809 419 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RPS26P42-201ENST00000413485 326 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RPL21P111-201ENST00000418453 477 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 SNRPGP13-201ENST00000442212 177 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 snoU13.30-201ENST00000458951 104 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AC010409.1-201ENST00000487382 476 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 SNORA20.3-201ENST00000516880 132 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 RNU1-54P-201ENST00000517181 120 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AC016256.1-201ENST00000547971 354 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 MIR4287-201ENST00000579398 78 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 MIR4273-201ENST00000582824 84 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AL022345.1-201ENST00000607292 135 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 AC137590.2-201ENST00000619709 240 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 MTND4P12-201ENST00000498999 1377 ntBASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV40A0A0B4J280 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.2-201ENST00000362330 96 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-862P-201ENST00000362804 105 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.72-201ENST00000362894 103 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 Y_RNA.474-201ENST00000384341 102 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-601P-201ENST00000384540 107 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 SNORA8-201ENST00000384574 139 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-160P-201ENST00000384591 107 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 MIR1283-1-201ENST00000408494 87 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNA5SP100-201ENST00000410903 110 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNA5SP59-201ENST00000410922 110 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC074085.1-201ENST00000413598 418 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC132942.1-201ENST00000486753 483 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC116353.2-201ENST00000505332 712 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC097473.1-201ENST00000508142 408 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-507P-201ENST00000516045 100 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-1041P-201ENST00000516254 102 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 SCARNA16.2-201ENST00000516520 172 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 RNU6-1016P-201ENST00000516689 94 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 MIR5094-201ENST00000578766 85 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AL773524.1-201ENST00000614065 229 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 TCL6_2.1-201ENST00000615162 119 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC022306.2-201ENST00000617563 647 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC130454.1-201ENST00000622948 401 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 AC068205.3-201ENST00000636385 468 ntBASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
TRAV40A0A0B4J280 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.106-201ENST00000363189 100 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-1305P-201ENST00000364353 104 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.238-201ENST00000364441 102 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNU4-9P-201ENST00000364951 139 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.319-201ENST00000365138 92 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.415-201ENST00000384012 112 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-17P-201ENST00000384245 107 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-1026P-201ENST00000384465 108 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-18P-201ENST00000384527 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms