Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL358934.1-201ENST00000432346 324 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1037P-201ENST00000459571 107 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 HMGB1P29-201ENST00000505659 499 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 SNORA14.1-201ENST00000516113 141 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AC104576.1-201ENST00000524225 88 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AL121579.1-201ENST00000555129 305 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 MIR4424-201ENST00000585257 86 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AL513534.2-201ENST00000603836 250 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AC022960.3-201ENST00000619794 441 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 AL359697.1-201ENST00000624879 587 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 snoZ196.1-201ENST00000625269 89 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 SCARNA4-201ENST00000629045 128 ntBASIC0.51□□□□□ -2.33
TRAV41A0A0B4J266 MTND4P5-201ENST00000435821 1374 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MT-TH-201ENST00000387441 69 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 RN7SKP200-201ENST00000410564 320 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MTATP6P18-201ENST00000417994 673 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MTND4P32-201ENST00000437189 1237 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AC073415.1-201ENST00000449240 153 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-221P-201ENST00000459541 99 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 SRRM1P2-201ENST00000464531 1192 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MTND1P22-201ENST00000510572 951 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 RNA5SP220-201ENST00000516298 104 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 RNU1-142P-201ENST00000516682 145 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 MIR4778-201ENST00000577635 80 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AL360219.1-201ENST00000610230 366 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AL359075.3-201ENST00000613288 217 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 uc_338.34-201ENST00000617467 174 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 AL513423.1-201ENST00000621695 132 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 SNORD3E-202ENST00000627253 216 ntBASIC0.5□□□□□ -2.33
TRAV41A0A0B4J266 Y_RNA.201-201ENST00000364052 96 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1240P-201ENST00000365155 104 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNY3P10-201ENST00000384764 102 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 MIR660-201ENST00000385235 97 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 SNORA26.8-201ENST00000391306 124 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 MRPL42P3-201ENST00000401492 326 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNU1-117P-201ENST00000517041 158 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNA5SP454-201ENST00000517231 127 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 AC090142.3-201ENST00000519012 385 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 SCOCP1-201ENST00000554676 349 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 MIR4714-201ENST00000580728 77 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 AC008536.2-201ENST00000607284 349 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 AC068787.1-201ENST00000623908 691 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 AL078596.1-201ENST00000624856 447 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 FER-210ENST00000628534 558 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 OR5AK4P-201ENST00000635912 903 ntBASIC0.49□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1120P-201ENST00000362988 108 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 MIR653-201ENST00000385279 96 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AL355796.1-201ENST00000406706 323 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1186P-201ENST00000410429 97 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 CDK8P2-201ENST00000415020 547 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-917P-201ENST00000516294 104 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AK6P2-201ENST00000549020 471 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 FRG2DP-202ENST00000566967 323 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 FGF7P1-201ENST00000582820 288 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 GHRLOS.1-201ENST00000610995 70 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 AC073349.3-201ENST00000617616 186 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 MIR6734-201ENST00000621166 68 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 ZNF204P-201ENST00000416749 2397 ntBASIC0.48□□□□□ -2.33
TRAV41A0A0B4J266 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AL390237.1-201ENST00000404226 1415 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU4-76P-201ENST00000364509 141 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1329P-201ENST00000365664 107 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 Y_RNA.381-201ENST00000365666 102 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1106P-201ENST00000390845 107 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC008134.1-201ENST00000420943 193 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC074290.1-201ENST00000448883 135 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-1038P-201ENST00000516516 104 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-344P-201ENST00000516635 111 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 RNU6-430P-201ENST00000517078 107 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 MTND1P5-201ENST00000517906 940 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 MTND4P7-201ENST00000523876 130 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms