Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNU6-1301P-201ENST00000362724 104 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.170-201ENST00000363746 110 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNY4P28-201ENST00000365281 93 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNY1P5-201ENST00000383890 115 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNU6-541P-201ENST00000384709 110 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 SNORA46-201ENST00000384762 135 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 MIR218-1-201ENST00000384999 110 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 MIR208B-201ENST00000401172 77 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AL139095.1-201ENST00000404326 391 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP201-201ENST00000410316 124 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNU2-20P-201ENST00000410425 191 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP21-201ENST00000410917 96 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 COX6CP10-201ENST00000416832 224 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AC140059.1-201ENST00000489238 361 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AP002392.1-201ENST00000537692 208 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AC027288.2-201ENST00000553028 243 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AL713866.2-201ENST00000603579 219 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 AC069528.2-201ENST00000624849 1991 ntBASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC187A0A096LP49 snoU2_19.1-201ENST00000362361 80 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 SNORD113-8-201ENST00000363497 74 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU6-47P-201ENST00000383866 107 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU6-937P-201ENST00000384325 106 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP213-201ENST00000391031 106 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU1-139P-201ENST00000391307 165 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.626-201ENST00000411288 95 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 TMSB4XP3-201ENST00000445144 114 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 UQCRHP3-201ENST00000451503 251 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC080013.2-201ENST00000460866 323 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 COX6CP14-201ENST00000469580 174 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AP000870.1-201ENST00000472927 406 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC145146.1-201ENST00000496370 254 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU6-1114P-201ENST00000516022 107 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 SNORA25.14-201ENST00000516481 132 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP54-201ENST00000516951 92 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 SCARNA24.2-201ENST00000516968 130 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 RNU6-58P-201ENST00000517143 103 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC091544.4-201ENST00000555268 342 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC105245.1-201ENST00000581934 244 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC069294.1-201ENST00000608397 350 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 PCGEM1.1-201ENST00000613431 131 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 AC021753.1-201ENST00000635724 168 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC187A0A096LP49 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 RNU6-222P-201ENST00000362438 107 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 RNU6-290P-201ENST00000365212 101 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 SNORD63-201ENST00000384262 68 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 MIR29B2-201ENST00000385055 81 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 RNU6-159P-201ENST00000391080 106 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.602-201ENST00000410535 92 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AL513328.1-201ENST00000446460 224 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC007215.1-201ENST00000464893 276 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 TRBV12-1-201ENST00000479785 344 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 RNA5SP76-201ENST00000516277 87 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 RNU6-861P-201ENST00000516745 106 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC087441.2-201ENST00000529141 262 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC024405.2-202ENST00000532731 184 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC023824.2-201ENST00000566185 400 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 MIR4282-201ENST00000583613 67 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 Y_RNA.772-201ENST00000606692 102 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.66□□□□□ -1.98
CCDC187A0A096LP49 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.98
CCDC187A0A096LP49 RNU1-72P-201ENST00000362976 153 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 U3.9-201ENST00000363823 204 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 MIR487A-201ENST00000385009 80 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 RNU6-651P-201ENST00000411040 105 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 SEPT14P8-201ENST00000508026 178 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 SNORD116-28-201ENST00000516123 91 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 EIF4A1P12-201ENST00000551910 141 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 MIR4659A-201ENST00000580269 81 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 MIR4423-201ENST00000580922 80 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 Z83818.1-201ENST00000603584 150 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 MZT1P2-201ENST00000604387 248 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 AC011476.5-201ENST00000615594 130 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CCDC187A0A096LP49 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms