Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 SNORD115-30-201ENST00000364117 82 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.361-201ENST00000365515 120 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 MIR549A-201ENST00000385268 96 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.586-201ENST00000391146 98 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC002075.2-201ENST00000425207 252 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 SEPT7P4-201ENST00000437076 306 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-313P-201ENST00000516317 112 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 MIR5688-201ENST00000580619 83 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 AC013791.1-201ENST00000616619 62 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.778-201ENST00000620203 90 ntBASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
HCFC2Q9Y5Z7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.89
HCFC2Q9Y5Z7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 MIR423-201ENST00000362201 94 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RNU4-15P-201ENST00000362613 141 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 SNORD114-19-201ENST00000363072 75 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-529P-201ENST00000363383 104 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 U3.9-201ENST00000363823 204 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-801P-201ENST00000364087 105 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-417P-201ENST00000384712 107 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-1168P-201ENST00000390831 104 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 AL355497.1-201ENST00000406262 551 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RPS20P10-201ENST00000451209 253 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RPS3P1-201ENST00000456781 192 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 snoU13.28-201ENST00000459235 104 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RPL31P41-201ENST00000477967 372 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 AC010409.1-201ENST00000487382 476 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 MIR5047-201ENST00000579212 100 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 MIR4431-201ENST00000579990 94 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 RPL17P51-201ENST00000605218 238 ntBASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HCFC2Q9Y5Z7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-376P-201ENST00000384731 106 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 SNORD67-201ENST00000390833 111 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 Z98941.1-201ENST00000407764 100 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AL135938.1-201ENST00000443141 297 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 RPL30P14-201ENST00000482744 348 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 RPL23AP70-201ENST00000483361 460 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC002076.2-201ENST00000617362 122 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC091895.1-201ENST00000624494 256 ntBASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC2Q9Y5Z7 AC026241.1-201ENST00000517873 2142 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 RNU6-324P-201ENST00000363957 106 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 Y_RNA.368-201ENST00000365547 113 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 MIR626-201ENST00000385032 94 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AL031003.1-201ENST00000404229 172 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 RNA5SP504-201ENST00000410676 117 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AC004866.1-201ENST00000411748 78 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 RHEBP3-201ENST00000411920 351 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 CR769767.1-201ENST00000436337 346 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AC004386.2-201ENST00000441858 148 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 U8.19-201ENST00000459095 133 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 SNORD116-25-201ENST00000516517 92 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 MIR4744-201ENST00000581563 82 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AL391813.1-201ENST00000603098 260 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 AC134026.1-201ENST00000623249 2239 ntBASIC3.25□□□□□ -1.89
HCFC2Q9Y5Z7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms