Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA40.14-201ENST00000516543 86 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORA31.25-201ENST00000517242 134 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RN7SKP295-201ENST00000517264 153 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-988P-201ENST00000519081 107 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.87□□□□□ -1.95
COL4A3BPQ9Y5P4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU4-82P-201ENST00000362443 140 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.27-201ENST00000362540 103 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORD87-201ENST00000364849 89 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORD78.2-201ENST00000391076 69 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORD23.1-201ENST00000408212 104 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR548P-201ENST00000408336 84 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORD12B-201ENST00000410433 91 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 MCFD2P1-201ENST00000417812 300 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 AC096644.2-201ENST00000429278 159 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 AL160004.2-201ENST00000432935 350 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 HMGB3P3-201ENST00000510526 400 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU4-77P-201ENST00000516692 156 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.701-201ENST00000516812 110 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 snoZ196.1-201ENST00000625269 89 ntBASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
COL4A3BPQ9Y5P4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-418P-201ENST00000384035 107 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR1302-11-201ENST00000408051 138 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR1302-9-201ENST00000408365 138 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR1302-10-201ENST00000408734 138 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 TOMM22P2-201ENST00000430735 237 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 AC107222.1-201ENST00000510899 637 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORA25.10-201ENST00000515926 124 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-107P-201ENST00000516643 102 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 RNU6-856P-201ENST00000516959 98 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 HSBP1P1-201ENST00000555205 166 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR5092-201ENST00000583139 88 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 MIR1302-2-201ENST00000607096 138 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A3BPQ9Y5P4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.28-201ENST00000362554 111 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 RNA5SP493-201ENST00000364115 91 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 Y_RNA.394-201ENST00000383942 103 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 FCF1P4-201ENST00000448326 183 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 SNORA40.9-201ENST00000515895 93 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 AC007229.1-201ENST00000590455 412 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 AC044792.1-201ENST00000593294 196 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 RPS29P30-201ENST00000600975 111 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 AC013412.1-201ENST00000610687 192 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 AL590240.4-201ENST00000616908 390 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A3BPQ9Y5P4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR340-201ENST00000362125 95 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AC117470.1-201ENST00000381974 330 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-474P-201ENST00000384243 107 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AL354751.2-201ENST00000415471 210 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AC008134.1-201ENST00000420943 193 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AL513328.1-201ENST00000446460 224 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 MTND4P19-201ENST00000446659 478 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 RN7SL636P-201ENST00000497504 294 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 AC012640.5-201ENST00000623897 319 ntBASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL4A3BPQ9Y5P4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.138-201ENST00000363462 102 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU1-138P-201ENST00000384093 164 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR548B-201ENST00000385247 97 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU11-3P-201ENST00000391111 133 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-57P-201ENST00000411348 103 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 PMCHL1-202ENST00000423102 261 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 CHEK2P4-201ENST00000450340 246 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-625P-201ENST00000459412 107 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 AC093852.1-201ENST00000503587 266 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNA5SP320-201ENST00000516263 124 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU2-19P-201ENST00000517288 84 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 SUMO2P18-201ENST00000518873 252 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR5188-201ENST00000583467 113 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 AC007485.1-201ENST00000616755 206 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 AL159152.1-201ENST00000635019 2587 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms