Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 AL445305.1-201ENST00000432577 575 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 U8.22-201ENST00000459141 133 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 MRPS35P2-201ENST00000508242 191 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 RNU6-635P-201ENST00000516651 102 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 SNORA40.15-201ENST00000516884 107 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 HSPE1P18-201ENST00000517602 280 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 COX6CP5-201ENST00000527162 228 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 UBL5P4-201ENST00000562584 236 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 SNRPGP20-201ENST00000604477 205 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
RAI2Q9Y5P3 Y_RNA.153-201ENST00000363615 91 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 SNORD115-8-201ENST00000363856 82 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 SNORD115-38-201ENST00000365037 82 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 RNU6-378P-201ENST00000384324 107 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 RNY3P4-201ENST00000384428 101 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 MIR499A-201ENST00000384903 122 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 MIR487A-201ENST00000385009 80 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 MIR10B-201ENST00000385011 110 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 SNORD78.2-201ENST00000391076 69 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 RNU6-159P-201ENST00000391080 106 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 HMGB3P2-201ENST00000411913 584 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AL358176.2-201ENST00000425769 204 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 U8.20-201ENST00000459445 131 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 RN7SL636P-201ENST00000497504 294 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC234781.5-201ENST00000508429 271 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC026436.1-201ENST00000510537 270 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 SCARNA3-201ENST00000517097 143 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC021269.2-201ENST00000532318 330 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC093023.1-201ENST00000547375 507 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AL121655.1-201ENST00000605811 308 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AL021879.1-201ENST00000611756 288 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 AC005520.5-201ENST00000613926 164 ntBASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.42□□□□□ -2.02
RAI2Q9Y5P3 WWP1P1-201ENST00000466609 2769 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC016717.2-201ENST00000609089 5141 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 MIR337-201ENST00000362281 93 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 RNU4-15P-201ENST00000362613 141 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 RNU6-238P-201ENST00000363313 106 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 SNORA68.1-201ENST00000364537 132 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 RNU6-708P-201ENST00000384217 107 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 RNU6-713P-201ENST00000384761 107 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 SDAD1P3-201ENST00000427380 333 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 EIF1P2-201ENST00000428233 350 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 Z96811.1-201ENST00000445880 108 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 SNORA25.14-201ENST00000516481 132 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC034114.1-201ENST00000520293 285 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC026470.2-201ENST00000561492 181 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC105245.1-201ENST00000581934 244 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 PRR13P7-201ENST00000605538 430 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC067747.1-201ENST00000608026 250 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 AC069294.1-201ENST00000608397 350 ntBASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
RAI2Q9Y5P3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RAI2Q9Y5P3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RAI2Q9Y5P3 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 Y_RNA.144-201ENST00000363521 113 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 RNU6-873P-201ENST00000363833 107 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 RNU6-245P-201ENST00000384020 107 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 SNORA46.1-201ENST00000391069 153 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 RPL30P4-201ENST00000429309 333 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 MICF-203ENST00000432679 129 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 RNU6-397P-201ENST00000516226 104 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 AC090517.1-201ENST00000569307 266 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 U6.92-201ENST00000636464 89 ntBASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.4□□□□□ -2.03
RAI2Q9Y5P3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RAI2Q9Y5P3 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
RAI2Q9Y5P3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms