Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAC1P2-201ENST00000511164 579 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORD59.2-201ENST00000516873 68 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR3186-201ENST00000577404 85 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 uc_338.4-201ENST00000616635 176 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC110079.1-202ENST00000635213 138 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 AC058791.1-201ENST00000608412 3198 ntBASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PCDHGA11Q9Y5H2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU1-18P-201ENST00000363062 164 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RNA5SP399-201ENST00000364003 117 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-978P-201ENST00000364371 103 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-1144P-201ENST00000384247 104 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-136P-201ENST00000384663 107 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 HMGN2P18-201ENST00000450680 270 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 PDCD5P2-201ENST00000507570 312 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR7157-201ENST00000635801 60 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR492-201ENST00000638676 116 ntBASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA11Q9Y5H2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-235P-201ENST00000362644 107 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 RNA5SP130-201ENST00000364431 114 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 U6atac.2-201ENST00000408644 118 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 AC126124.2-201ENST00000413542 321 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 AC063976.3-201ENST00000426849 329 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 MICF-203ENST00000432679 129 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 U3.44-201ENST00000458938 192 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 RPL23AP91-201ENST00000569211 455 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 AC131055.1-201ENST00000584626 316 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR6830-201ENST00000636015 70 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 U6.95-201ENST00000636931 70 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 GABRG2-229ENST00000641017 3628 ntBASIC3.8□□□□□ -1.8
PCDHGA11Q9Y5H2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU6-546P-201ENST00000383991 107 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORA70C-201ENST00000384538 135 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AL356095.1-201ENST00000417217 199 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORA4.4-201ENST00000515921 135 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU7-172P-201ENST00000517125 64 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 RNA5SP490-201ENST00000517141 136 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR3121-201ENST00000579680 77 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR4438-201ENST00000585271 93 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC023043.3-201ENST00000593113 385 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AL929325.1-201ENST00000603096 117 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC091167.4-201ENST00000605079 184 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AC244205.2-202ENST00000635781 342 ntBASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA11Q9Y5H2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 RNU1-22P-201ENST00000363334 158 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 DBIP2-201ENST00000419076 262 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 RPL39P40-201ENST00000445481 146 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 RPL27AP5-201ENST00000469428 449 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 SNORD77.4-201ENST00000516158 81 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 RNA5SP179-201ENST00000517284 121 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 YPEL5P3-201ENST00000547227 352 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 MIR5739-201ENST00000619803 80 ntBASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA11Q9Y5H2 AC138915.1-201ENST00000565427 1685 ntBASIC3.78□□□□□ -1.81
PCDHGA11Q9Y5H2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU1-72P-201ENST00000362976 153 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 RNU6-1336P-201ENST00000383886 109 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 MIR1253-201ENST00000408273 105 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AL158823.1-201ENST00000418441 478 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 AL158147.1-201ENST00000443970 75 ntBASIC3.77□□□□□ -1.81
PCDHGA11Q9Y5H2 RN7SL330P-201ENST00000469709 307 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms