Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU4-36P-201ENST00000364294 144 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 Y_RNA.298-201ENST00000364960 107 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-497P-201ENST00000365316 104 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-1276P-201ENST00000365372 104 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-1235P-201ENST00000384559 107 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-750P-201ENST00000390946 107 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC012671.1-201ENST00000451912 203 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-498P-201ENST00000459468 107 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RPL21P129-201ENST00000491732 478 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 RN7SKP282-201ENST00000516824 299 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 SUMO2P16-201ENST00000519475 264 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC109329.2-201ENST00000519658 482 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC013412.1-201ENST00000610687 192 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AP003122.5-201ENST00000527668 3766 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 AC080128.1-201ENST00000474389 1917 ntBASIC4.25□□□□□ -1.73
PCDHB3Q9Y5E6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 SNORD31B-201ENST00000364977 69 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-234P-201ENST00000365229 104 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-418P-201ENST00000384035 107 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-242P-201ENST00000384359 107 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 MIR513A2-201ENST00000385249 127 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 MIR1294-201ENST00000408503 142 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 RNA5SP490-201ENST00000517141 136 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 AC021443.1-201ENST00000604478 211 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 uc_338.32-201ENST00000615087 172 ntBASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDHB3Q9Y5E6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-349P-201ENST00000362402 107 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 Y_RNA.73-201ENST00000362910 113 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RNA5SP366-201ENST00000365454 123 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 MIR3074-201ENST00000384885 81 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC004552.1-201ENST00000419089 348 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 SNRPGP13-201ENST00000442212 177 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RPL23AP67-201ENST00000465341 474 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RPS26P3-201ENST00000470205 348 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC090543.2-201ENST00000483963 348 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC004057.1-201ENST00000485827 348 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC091167.1-201ENST00000492017 396 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RPS29P21-201ENST00000496272 170 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-1096P-201ENST00000517089 102 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC022254.1-201ENST00000567857 235 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 uc_338.13-201ENST00000618243 179 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 AC006504.1-201ENST00000562493 3666 ntBASIC4.23□□□□□ -1.73
PCDHB3Q9Y5E6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 SNORD74.4-201ENST00000364129 80 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-787P-201ENST00000384032 107 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-1104P-201ENST00000384723 104 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 MIR518F-201ENST00000384973 87 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 RNU6-279P-201ENST00000391297 101 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 RNU2-37P-201ENST00000410695 177 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 DBIP2-201ENST00000419076 262 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC008507.4-201ENST00000585464 127 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC079587.1-201ENST00000603846 277 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AL160290.3-201ENST00000604869 165 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC113403.1-201ENST00000604910 193 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 AC090517.3-201ENST00000625170 141 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 MIR3653-201ENST00000625572 110 ntBASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms