Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 RNU6-460P-201ENST00000391158 108 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 RNU7-197P-201ENST00000458836 62 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 SCARNA8-201ENST00000515924 131 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 RNU6-659P-201ENST00000516454 104 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 SNORA31.23-201ENST00000517219 133 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
TSC22D4Q9Y3Q8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TSC22D4Q9Y3Q8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
TSC22D4Q9Y3Q8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.92
TSC22D4Q9Y3Q8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-834P-201ENST00000362367 110 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 Y_RNA.293-201ENST00000364908 93 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 SNORD37.2-201ENST00000391075 66 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 U3.40-201ENST00000408706 208 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC006461.1-201ENST00000412637 326 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC096649.2-201ENST00000416186 393 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC012306.1-201ENST00000423267 114 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC244670.1-201ENST00000436879 112 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 MTATP6P7-201ENST00000453315 681 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 PRSS3P4-201ENST00000453323 162 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU7-107P-201ENST00000459121 61 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 CYCTP-201ENST00000504253 315 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-1007P-201ENST00000516586 107 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 SNORA31.16-201ENST00000516773 139 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 RNA5SP170-201ENST00000517150 101 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 CYCSP23-201ENST00000519781 313 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC109810.1-201ENST00000534066 224 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC021231.3-201ENST00000558497 370 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AL161756.2-201ENST00000604597 246 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 MIR6129-201ENST00000616087 109 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 MIR7975-201ENST00000619350 68 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 TUG1_4.1-201ENST00000619464 181 ntBASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.08□□□□□ -1.92
TSC22D4Q9Y3Q8 AF117829.1-206ENST00000621883 3802 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-1255P-201ENST00000363434 112 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-103P-201ENST00000363686 107 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 Y_RNA.337-201ENST00000365312 102 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU1-73P-201ENST00000383971 164 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-1310P-201ENST00000384153 107 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNA5SP475-201ENST00000410568 110 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU4-47P-201ENST00000410876 114 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU2-12P-201ENST00000517216 168 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 FTX_3.1-201ENST00000610451 147 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC013791.1-201ENST00000616619 62 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 MIR6134-201ENST00000617606 109 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 MIR3529-201ENST00000637713 78 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 AC103988.1-201ENST00000566382 2177 ntBASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TSC22D4Q9Y3Q8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 AC092268.1-201ENST00000342691 405 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 Y_RNA.24-201ENST00000362508 103 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RNY1P11-201ENST00000363759 113 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU5F-3P-201ENST00000363767 117 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-407P-201ENST00000365280 104 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RNU6-376P-201ENST00000384731 106 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 MIR626-201ENST00000385032 94 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RPS26P42-201ENST00000413485 326 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 AC078809.1-201ENST00000427601 140 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 RPS12P18-201ENST00000442381 270 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 AC092991.1-201ENST00000477176 376 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 FAM35BP-202ENST00000497389 3337 ntBASIC3.06□□□□□ -1.92
TSC22D4Q9Y3Q8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms