Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 RNU6-324P-201ENST00000363957 106 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 SNORD87-201ENST00000364849 89 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 HMGN2P7-201ENST00000456186 273 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 AC112771.1-201ENST00000463581 102 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 RPS27AP9-201ENST00000477681 438 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 RPL36AP48-201ENST00000485521 314 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 AC107934.2-201ENST00000518653 310 ntBASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIT1Q9Y3P8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 RNU4-82P-201ENST00000362443 140 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 RNU6-283P-201ENST00000364788 107 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.368-201ENST00000365547 113 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 SNORA54-201ENST00000384281 123 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 HMGN2P8-201ENST00000391458 268 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 MIR1261-201ENST00000408659 82 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 RNA5SP184-201ENST00000411071 108 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AL135790.2-201ENST00000437701 267 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 MIR3684-201ENST00000579779 74 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 uc_338.25-201ENST00000613756 156 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 MIR4727-201ENST00000622232 55 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AF127577.6-201ENST00000623352 2191 ntBASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIT1Q9Y3P8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 SNORD114-7-201ENST00000362520 77 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 RNU4-84P-201ENST00000364200 139 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 SNORD32B-201ENST00000364460 84 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.412-201ENST00000384001 104 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 MIR586-201ENST00000385035 97 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 RNU6-381P-201ENST00000391259 108 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 U8.19-201ENST00000459095 133 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 MIR4319-201ENST00000577285 85 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 AL713866.2-201ENST00000603579 219 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 AC013791.1-201ENST00000616619 62 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 U6.115-201ENST00000636045 103 ntBASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SIT1Q9Y3P8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 MIR22-201ENST00000362190 85 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 RNU1-105P-201ENST00000363470 161 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.456-201ENST00000384232 111 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AL355497.1-201ENST00000406262 551 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 RNU2-2P-201ENST00000410396 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC097463.2-201ENST00000421074 142 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC105272.1-201ENST00000438604 198 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 SRIP1-201ENST00000489235 288 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 RNU1-117P-201ENST00000517041 158 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 MIR5688-201ENST00000580619 83 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC110741.2-201ENST00000605278 268 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 RNU2-4P-201ENST00000606190 192 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.15-201ENST00000611544 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.16-201ENST00000613119 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.12-201ENST00000613778 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.9-201ENST00000615427 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.11-201ENST00000616345 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.2-201ENST00000616535 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.3-201ENST00000617785 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.19-201ENST00000618602 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 RNU2-1-201ENST00000618664 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.6-201ENST00000619225 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.5-201ENST00000619465 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 U2.10-201ENST00000620268 191 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AC010329.5-201ENST00000623497 2174 ntBASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.16□□□□□ -1.9
SIT1Q9Y3P8 MAPK10-253ENST00000641010 4072 ntBASIC3.15□□□□□ -1.9
SIT1Q9Y3P8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.287-201ENST00000364853 94 ntBASIC3.15□□□□□ -1.91
SIT1Q9Y3P8 RNU6-275P-201ENST00000364910 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms