Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-505P-201ENST00000384427 107 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 SNORA67.4-201ENST00000384688 142 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 MIR329-1-201ENST00000385028 80 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 MIR27B-201ENST00000385129 97 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 MT-TG-201ENST00000387429 68 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AC025465.3-201ENST00000510570 311 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.668-201ENST00000516233 93 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AP003733.2-201ENST00000529409 171 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AL670379.2-201ENST00000604983 252 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AC010999.1-201ENST00000611856 324 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 AC069528.2-201ENST00000624849 1991 ntBASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SSX2IPQ9Y2D8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 LINC02555-201ENST00000563933 1951 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 MIR6073-201ENST00000352083 89 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.288-201ENST00000364854 92 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 Y_RNA.461-201ENST00000384263 103 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AL079342.1-201ENST00000401460 267 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 RNU6-1001P-201ENST00000411265 100 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC145146.1-201ENST00000496370 254 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC008413.1-201ENST00000511864 177 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 RNA5SP24-201ENST00000516478 95 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 SNORA25.14-201ENST00000516481 132 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 RNU1-104P-201ENST00000517280 175 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC110588.1-201ENST00000559699 137 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC026470.2-201ENST00000561492 181 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 SNORD53-201ENST00000579969 78 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC062037.2-201ENST00000610137 73 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 AC064859.1-201ENST00000624741 174 ntBASIC2.78□□□□□ -1.96
SSX2IPQ9Y2D8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AC080100.1-201ENST00000624239 5356 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 snoU2_19.1-201ENST00000362361 80 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.143-201ENST00000363520 106 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 SNORA68.1-201ENST00000364537 132 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-806P-201ENST00000365147 105 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.396-201ENST00000383949 103 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-926P-201ENST00000384075 107 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 SNORD115-46-201ENST00000390982 71 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AL445305.1-201ENST00000432577 575 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 MICF-203ENST00000432679 129 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AL121890.1-201ENST00000435457 205 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 AC011476.5-201ENST00000615594 130 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 MIR376A1-201ENST00000616574 68 ntBASIC2.77□□□□□ -1.97
SSX2IPQ9Y2D8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 RNU1-62P-201ENST00000362599 164 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.376-201ENST00000365638 108 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 SNORD63-201ENST00000384262 68 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-472P-201ENST00000384299 107 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-121P-201ENST00000410525 99 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC096920.1-201ENST00000423991 241 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC010095.1-201ENST00000443543 144 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC007395.1-201ENST00000451333 677 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 YWHAEP4-201ENST00000505390 198 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-408P-201ENST00000515910 100 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 MIR4300-201ENST00000581016 96 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 MIR7157-201ENST00000635801 60 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 MIR7515-201ENST00000637837 67 ntBASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSX2IPQ9Y2D8 Z82209.1-201ENST00000422141 2135 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 Y_RNA.188-201ENST00000363952 111 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 SNORA67.1-201ENST00000364749 141 ntBASIC2.75□□□□□ -1.97
SSX2IPQ9Y2D8 RNU6-793P-201ENST00000384233 104 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 276.5 ms