Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 AL133215.3-201ENST00000609801 448 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 AC006001.4-201ENST00000622243 395 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 AL359697.1-201ENST00000624879 587 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 SCARNA4-201ENST00000629045 128 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
NPIPA1Q9UND3 RNU6-975P-201ENST00000384296 105 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 AL590002.1-201ENST00000406554 418 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 MTCO3P29-201ENST00000432119 779 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 JTBP1-201ENST00000441314 247 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 AC114982.1-201ENST00000469402 321 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 RNU2-34P-201ENST00000516534 121 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 RNU1-117P-201ENST00000517041 158 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 AC137590.2-201ENST00000619709 240 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 ICE2P2-201ENST00000483823 2787 ntBASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NPIPA1Q9UND3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MTND4P5-201ENST00000435821 1374 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU4-75P-201ENST00000364621 146 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU6-128P-201ENST00000383976 107 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU6-331P-201ENST00000384724 107 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MIR320B2-201ENST00000408479 138 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU6-908P-201ENST00000410160 94 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AL590632.1-201ENST00000424289 371 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MTCO1P20-201ENST00000425366 358 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AC073910.1-201ENST00000445047 438 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 RNU6-498P-201ENST00000459468 107 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AC007215.1-201ENST00000464893 276 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AC024909.2-201ENST00000553035 286 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MIR8070-201ENST00000616510 88 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 AC099654.12-201ENST00000639868 649 ntBASIC1.34□□□□□ -2.19
NPIPA1Q9UND3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
NPIPA1Q9UND3 SNORD50.1-201ENST00000362987 71 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 Y_RNA.194-201ENST00000363985 102 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 RNU6-57P-201ENST00000411348 103 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 CST2P1-201ENST00000425770 87 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 FTH1P12-201ENST00000432137 551 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 HMGN2P34-201ENST00000437647 269 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 RNU7-57P-201ENST00000459540 60 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 RNA5SP481-201ENST00000516814 122 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 AF250324.2-201ENST00000608299 610 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 AC048344.4-201ENST00000619744 527 ntBASIC1.33□□□□□ -2.2
NPIPA1Q9UND3 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 SNORA63D-201ENST00000364359 132 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 SNORA25.9-201ENST00000365087 128 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 RNU6-417P-201ENST00000384712 107 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 MIR32-201ENST00000384965 70 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 RNU6-332P-201ENST00000391193 108 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 MIR1253-201ENST00000408273 105 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AC007098.1-201ENST00000420122 367 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 DLGAP5P1-201ENST00000430307 464 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AC074290.1-201ENST00000448883 135 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 POLR3GP2-201ENST00000588366 668 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 AL078596.1-201ENST00000624856 447 ntBASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
NPIPA1Q9UND3 Y_RNA.41-201ENST00000362646 102 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 RNU6-95P-201ENST00000384697 107 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 Z82188.1-201ENST00000436709 154 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AC069257.2-201ENST00000441819 155 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 MTND1P11-201ENST00000456661 876 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms