Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 SNORA70.2-201ENST00000364506 135 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 Y_RNA.281-201ENST00000364774 94 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 AC097462.1-201ENST00000514125 324 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-113P-201ENST00000516653 101 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 RNU7-172P-201ENST00000517125 64 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 MIR4438-201ENST00000585271 93 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 uc_338.28-201ENST00000612082 187 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 IPO8P1-201ENST00000455509 3109 ntBASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGC3Q9UN70 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-418P-201ENST00000384035 107 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNU1-13P-201ENST00000384499 162 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-1274P-201ENST00000384557 107 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RPL21P65-201ENST00000406094 466 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNA5SP136-201ENST00000410906 107 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-844P-201ENST00000517175 102 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RNA5SP179-201ENST00000517284 121 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 AC091167.4-201ENST00000605079 184 ntBASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHGC3Q9UN70 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 Y_RNA.486-201ENST00000384398 107 ntBASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 RNU11-5P-201ENST00000391216 129 ntBASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 RNY4P30-201ENST00000410216 95 ntBASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 AC018634.1-201ENST00000437554 401 ntBASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-586P-201ENST00000517265 104 ntBASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHGC3Q9UN70 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-944P-201ENST00000364023 107 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 Y_RNA.242-201ENST00000364473 110 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-1292P-201ENST00000383856 107 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AL031121.1-201ENST00000406553 254 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 RN7SKP202-201ENST00000410439 330 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 NDUFB1P1-201ENST00000435191 180 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 RNA5SP309-201ENST00000516670 106 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 AC002064.3-201ENST00000623448 346 ntBASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
PCDHGC3Q9UN70 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 Y_RNA.66-201ENST00000362862 102 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-508P-201ENST00000363231 103 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-106P-201ENST00000384405 107 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 MIR520G-201ENST00000385064 90 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 MIR1263-201ENST00000408324 86 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RNU6-1077P-201ENST00000410506 102 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 AC016909.1-201ENST00000415916 166 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RN7SL385P-201ENST00000468873 276 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RAC1P2-201ENST00000511164 579 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 AC026726.1-201ENST00000512859 601 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 AC007751.1-201ENST00000529260 376 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 AL591926.4-201ENST00000616895 298 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 RNA5SP196-201ENST00000625967 102 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGC3Q9UN70 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGC3Q9UN70 Y_RNA.528-201ENST00000384575 108 ntBASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 MIR199A2-201ENST00000385289 110 ntBASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 AL031183.1-201ENST00000457667 207 ntBASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 PARP1P2-201ENST00000556806 195 ntBASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 MIR3117-201ENST00000584034 78 ntBASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
PCDHGC3Q9UN70 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms