Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNORA51.4-201ENST00000364993 124 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 MIR29B2-201ENST00000385055 81 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 RN7SKP51-201ENST00000410781 304 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 RNA5SP344-201ENST00000411081 104 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AL392103.1-201ENST00000447000 198 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 MIR4308-201ENST00000580634 81 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AL008718.3-201ENST00000610217 321 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AC008873.1-201ENST00000625051 138 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 AC090517.3-201ENST00000625170 141 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 U6.106-201ENST00000636360 105 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 AL355596.1-201ENST00000565399 3996 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 SNORD115-30-201ENST00000364117 82 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 SNORA46-201ENST00000384762 135 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 MIR670-201ENST00000390142 98 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 SNORA48.7-201ENST00000391302 135 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 YME1L1P1-201ENST00000429435 297 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 RPL23AP67-201ENST00000465341 474 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 RNU6-406P-201ENST00000516470 107 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 AC017071.1-201ENST00000564407 2204 ntBASIC3.89□□□□□ -1.79
BRPF3Q9ULD4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AC010329.5-201ENST00000623497 2174 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RNU6-486P-201ENST00000363116 107 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 U8.9-201ENST00000365667 134 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RNA5SP171-201ENST00000391071 115 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AL031003.1-201ENST00000404229 172 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RN7SKP27-201ENST00000410684 333 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 UBBP3-201ENST00000445497 241 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 UQCRHP3-201ENST00000451503 251 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RN7SL499P-201ENST00000481141 276 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RPL21P129-201ENST00000491732 478 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RNA5SP217-201ENST00000515959 91 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 RNU6-789P-201ENST00000517105 102 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AC009127.3-201ENST00000570531 403 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 MIR5692C2-201ENST00000577959 77 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 MIR3133-201ENST00000583157 78 ntBASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.88□□□□□ -1.79
BRPF3Q9ULD4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 RNU6-653P-201ENST00000363074 106 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 Y_RNA.435-201ENST00000384095 112 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 MIR548B-201ENST00000385247 97 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 RNA5SP229-201ENST00000410809 99 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 Z75741.1-201ENST00000446793 314 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 AC140059.1-201ENST00000489238 361 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 MIR4276-201ENST00000584832 70 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 MIR7975-201ENST00000619350 68 ntBASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BRPF3Q9ULD4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 SNORA26.7-201ENST00000391288 122 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 HMGB3P3-201ENST00000510526 400 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 RNU5F-4P-201ENST00000516581 114 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 RNU6-1098P-201ENST00000516772 96 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 uc_338.1-201ENST00000612113 180 ntBASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.86□□□□□ -1.79
BRPF3Q9ULD4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 SNORA68.1-201ENST00000364537 132 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 MIR586-201ENST00000385035 97 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 BMS1P22-201ENST00000414726 313 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 AC115115.1-201ENST00000449927 248 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 RPL21P10-201ENST00000463521 490 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 AC091153.1-201ENST00000466297 402 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 SRIP1-201ENST00000489235 288 ntBASIC3.85□□□□□ -1.79
BRPF3Q9ULD4 RPPH1-2P-201ENST00000516688 293 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms