Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 USP9YP11-201ENST00000427537 717 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 MRPS10P2-201ENST00000431226 381 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 RPL39P6-201ENST00000448289 150 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 AL122001.1-201ENST00000457027 370 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 AC104629.1-201ENST00000494226 508 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 CR383656.4-201ENST00000546909 122 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 MIR548AO-201ENST00000579992 96 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 AC112487.2-201ENST00000637950 304 ntBASIC-0.84□□□□□ -2.54
SCN11AQ9UI33 RNU6-114P-201ENST00000384704 105 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 RPL39P34-201ENST00000477141 156 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 MIR1273C-201ENST00000578669 77 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 AC090897.1-201ENST00000580909 226 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 MIR4637-201ENST00000582405 84 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 AC096586.1-201ENST00000610267 561 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 RNA5SP201-201ENST00000410316 124 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 MTND4P15-201ENST00000437913 1033 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 SNORD111.1-201ENST00000516421 86 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 MTCO3P15-201ENST00000526563 574 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 AC078795.3-201ENST00000602913 472 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 AP000484.1-201ENST00000620067 1252 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 MIR499B-201ENST00000636498 73 ntBASIC-0.85□□□□□ -2.55
SCN11AQ9UI33 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 SNORA25.7-201ENST00000364375 127 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AL049545.1-201ENST00000401856 572 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 MTND4P32-201ENST00000437189 1237 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AC007215.1-201ENST00000464893 276 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AL670379.3-201ENST00000605040 251 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 AP002360.4-201ENST00000606980 481 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 uc_338.28-201ENST00000612082 187 ntBASIC-0.86□□□□□ -2.55
SCN11AQ9UI33 SNORA36.1-201ENST00000363424 132 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 RNU6-975P-201ENST00000384296 105 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 MTCYBP2-201ENST00000407745 171 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 AC133104.1-201ENST00000429100 218 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 AC107401.1-201ENST00000503426 685 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 RNU6-948P-201ENST00000516374 107 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 RNU2-60P-201ENST00000517290 128 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 TMF1P1-201ENST00000576058 373 ntBASIC-0.87□□□□□ -2.55
SCN11AQ9UI33 RNU6-934P-201ENST00000365154 107 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 RNU6-580P-201ENST00000365159 107 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 RNU6-650P-201ENST00000365658 111 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 MIR301A-201ENST00000385261 86 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AL663109.1-201ENST00000411498 844 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 MTCO1P5-201ENST00000433573 344 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AP000870.1-201ENST00000472927 406 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AC104383.1-201ENST00000530297 370 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AP000811.1-201ENST00000603803 651 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 SNORA28-201ENST00000606769 126 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AL357080.1-201ENST00000617394 239 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 RNU6-657P-201ENST00000383904 107 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 RNU6-424P-201ENST00000384367 105 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 MIR1207-201ENST00000408249 87 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 COX7BP2-201ENST00000437976 242 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 U8.21-201ENST00000459536 136 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 SNORA59B-202ENST00000578183 701 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AC100830.2-201ENST00000581636 240 ntBASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.88□□□□□ -2.55
SCN11AQ9UI33 RNU6-252P-201ENST00000363232 107 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 snoZ40.1-201ENST00000364540 72 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 MIR587-201ENST00000384845 96 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 MTCYBP39-201ENST00000437562 491 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 MTCO3P27-201ENST00000514397 196 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 RNU7-12P-201ENST00000516030 62 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 RNU6-714P-201ENST00000516963 103 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AP001372.4-201ENST00000524889 472 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AC246785.4-201ENST00000605374 287 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 AP000676.3-201ENST00000623299 569 ntBASIC-0.89□□□□□ -2.55
SCN11AQ9UI33 MIR101-2-201ENST00000362195 79 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 SNORA12.1-201ENST00000390873 148 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 MRPL42P3-201ENST00000401492 326 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 MTCO2P31-201ENST00000402702 684 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AL133264.1-201ENST00000407157 562 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 MLLT10P1-201ENST00000418346 262 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AL139421.1-201ENST00000423010 169 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AC245047.3-201ENST00000429428 127 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AC007969.2-201ENST00000441891 191 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 RNU7-59P-201ENST00000459101 61 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms