Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC133104.1-201ENST00000429100 218 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 NDUFB4P10-201ENST00000452541 359 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC008628.2-201ENST00000502605 298 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC108078.1-201ENST00000508073 725 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.682-201ENST00000516457 100 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 RNA5SP481-201ENST00000516814 122 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC211469.2-201ENST00000605461 205 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 AC006504.8-201ENST00000621046 635 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.62□□□□□ -2.31
CCDC88CQ9P219 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.77-201ENST00000362962 107 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 SNORD115-8-201ENST00000363856 82 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.296-201ENST00000364930 108 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 SNORD115-38-201ENST00000365037 82 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 RNU6-827P-201ENST00000365553 106 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 SNORD116-1-201ENST00000384335 95 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 RNU6-1026P-201ENST00000384465 108 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 RNY3P9-201ENST00000384727 106 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 RNU6-1158P-201ENST00000391167 107 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC092447.3-201ENST00000426027 686 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC074290.1-201ENST00000448883 135 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC022364.2-201ENST00000457963 554 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC005178.1-201ENST00000508392 440 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 SNORA31.4-201ENST00000516049 129 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 RNU2-46P-201ENST00000517038 113 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC104383.1-201ENST00000530297 370 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 MTCO3P23-201ENST00000561363 289 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 MIR4653-201ENST00000585107 83 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 MIR4753-201ENST00000585119 83 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC004223.2-201ENST00000590309 544 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AC091805.2-201ENST00000603848 235 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 AP001836.1-201ENST00000604675 523 ntBASIC0.61□□□□□ -2.31
CCDC88CQ9P219 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.61□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.1-201ENST00000352915 104 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-545P-201ENST00000362681 104 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-950P-201ENST00000384651 107 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR515-2-201ENST00000384883 83 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR515-1-201ENST00000384884 83 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MTND3P9-201ENST00000429526 346 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MTND1P27-201ENST00000451117 902 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 HMGN2P9-201ENST00000476875 229 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 SNORA19.2-201ENST00000516013 114 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-189P-201ENST00000516120 101 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-1098P-201ENST00000516772 96 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC026371.1-201ENST00000551867 419 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR5583-1-201ENST00000580941 59 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR4661-201ENST00000582720 75 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC146944.4-201ENST00000602697 718 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC112191.3-201ENST00000604371 277 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC090582.1-201ENST00000636321 199 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MTND4P14-201ENST00000435799 1354 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 U3.9-201ENST00000363823 204 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR19B1-201ENST00000384829 87 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR100-201ENST00000385259 80 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AL606923.1-201ENST00000406616 190 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RPS26P42-201ENST00000413485 326 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MTATP6P18-201ENST00000417994 673 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 HMGN2P34-201ENST00000437647 269 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 SNRPEP8-201ENST00000442866 260 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-856P-201ENST00000516959 98 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 SUMO2P16-201ENST00000519475 264 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC060788.1-201ENST00000521318 469 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC022432.1-201ENST00000595739 310 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC087752.4-201ENST00000605911 462 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 RNU6-85P-201ENST00000605989 107 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC092354.1-201ENST00000606057 376 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AL158209.2-201ENST00000619266 216 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 AC023510.2-201ENST00000622162 746 ntBASIC0.6□□□□□ -2.31
CCDC88CQ9P219 MIR340-201ENST00000362125 95 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 MIR302D-201ENST00000362275 68 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.38-201ENST00000362617 102 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU4-21P-201ENST00000362802 126 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU6-553P-201ENST00000364047 96 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 Y_RNA.201-201ENST00000364052 96 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU6-1322P-201ENST00000364309 107 ntBASIC0.59□□□□□ -2.31
CCDC88CQ9P219 RNU6-259P-201ENST00000383999 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms