Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL390237.1-201ENST00000404226 1415 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL034345.1-201ENST00000407768 123 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 RNU6-248P-201ENST00000410720 107 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL356010.1-201ENST00000456364 102 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 U8.21-201ENST00000459536 136 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC007215.1-201ENST00000464893 276 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC104576.1-201ENST00000524225 88 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL590705.4-201ENST00000532209 134 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL121579.1-201ENST00000555129 305 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 MIR4778-201ENST00000577635 80 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AL513423.1-201ENST00000621695 132 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 AC139792.3-201ENST00000623525 224 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
VAPAQ9P0L0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
VAPAQ9P0L0 RNU4-21P-201ENST00000362802 126 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 SNORA67.2-201ENST00000384300 149 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 RNY3P10-201ENST00000384764 102 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 SNORA12.1-201ENST00000390873 148 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 MIR320B2-201ENST00000408479 138 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 CDK8P2-201ENST00000415020 547 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 MTND4P32-201ENST00000437189 1237 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 SNRPGP9-201ENST00000456025 225 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 RNU7-180P-201ENST00000459240 63 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 RNU6-221P-201ENST00000459541 99 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 MIR3915-201ENST00000578518 97 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 AC080078.2-201ENST00000603766 501 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 uc_338.34-201ENST00000617467 174 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 AC073349.3-201ENST00000617616 186 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 SCARNA4-201ENST00000629045 128 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 ZNF204P-201ENST00000416749 2397 ntBASIC0.67□□□□□ -2.3
VAPAQ9P0L0 FGF7P2-201ENST00000332473 296 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 RNU6-1120P-201ENST00000362988 108 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MIR200A-201ENST00000384875 90 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AF228730.1-201ENST00000397972 663 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AL355796.1-201ENST00000406706 323 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MTATP6P18-201ENST00000417994 673 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AF186996.7-201ENST00000492781 209 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 SNORA14.1-201ENST00000516113 141 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AC060788.1-201ENST00000521318 469 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MTND4P7-201ENST00000523876 130 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 FGF7P1-201ENST00000582820 288 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AC022432.1-201ENST00000595739 310 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
VAPAQ9P0L0 HULC.1-201ENST00000612720 240 ntBASIC0.66□□□□□ -2.3
VAPAQ9P0L0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
VAPAQ9P0L0 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MIR660-201ENST00000385235 97 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MT-TH-201ENST00000387441 69 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MTND2P18-201ENST00000419962 1030 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MTCO2P11-201ENST00000431069 680 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AL358934.1-201ENST00000432346 324 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 RNU7-63P-201ENST00000459054 62 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 HMGN1P7-201ENST00000491722 313 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 CCDC34P1-201ENST00000507441 517 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MTND1P22-201ENST00000510572 951 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 RNU6-113P-201ENST00000516653 101 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 MIR3913-1-201ENST00000577744 102 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AL359821.1-201ENST00000605519 182 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AL359757.2-201ENST00000624309 274 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 AC008873.1-201ENST00000625051 138 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 FER-210ENST00000628534 558 ntTSL 5 BASIC0.65□□□□□ -2.31
VAPAQ9P0L0 OR5AK4P-201ENST00000635912 903 ntBASIC0.65□□□□□ -2.31
VAPAQ9P0L0 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 MIR487A-201ENST00000385009 80 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 SNORD41-201ENST00000386967 70 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VAPAQ9P0L0 Y_RNA.595-201ENST00000410403 105 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AC092473.1-201ENST00000441098 221 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
VAPAQ9P0L0 BET1P1-201ENST00000482276 359 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 RNA5SP454-201ENST00000517231 127 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AC108706.1-201ENST00000611053 297 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AC137590.2-201ENST00000619709 240 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms