Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 Y_RNA.495-201ENST00000384435 112 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RNU6-376P-201ENST00000384731 106 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RNU6-578P-201ENST00000390980 103 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 SNORA40.5-201ENST00000391061 128 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 AC019205.3-201ENST00000424573 156 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 AIMP1P2-201ENST00000425294 312 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RPS29P20-201ENST00000489592 171 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 TRBV12-2-201ENST00000489763 344 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RPL30P5-201ENST00000494923 336 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RNA5SP380-201ENST00000517190 98 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 U7.2-201ENST00000607576 63 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 MIR3674-201ENST00000636576 68 ntBASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMCD1Q9NZU5 RNY1P11-201ENST00000363759 113 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNU4-10P-201ENST00000364383 140 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 SNORA12.1-201ENST00000390873 148 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNA5SP293-201ENST00000410527 113 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNY4P29-201ENST00000410801 97 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 AC006539.3-201ENST00000454258 129 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNU6-107P-201ENST00000516643 102 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 RN7SKP209-201ENST00000516888 304 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 AC021269.2-201ENST00000532318 330 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 MIR3690-201ENST00000580266 75 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.83
LMCD1Q9NZU5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 FAM35BP-202ENST00000497389 3337 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 RNU6-799P-201ENST00000363567 107 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 SNORA5B-201ENST00000363786 132 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 RNA5SP126-201ENST00000365092 109 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 SNORA44-201ENST00000384584 132 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 RN7SL442P-201ENST00000473804 320 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC090525.1-201ENST00000479116 478 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 RNU6-436P-201ENST00000516171 114 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC009163.5-201ENST00000575421 637 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC104984.5-201ENST00000586878 94 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC006380.1-201ENST00000603598 186 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC069294.1-201ENST00000608397 350 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 MIR3529-201ENST00000637713 78 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 AC134026.1-201ENST00000623249 2239 ntBASIC3.64□□□□□ -1.83
LMCD1Q9NZU5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RNU6-32P-201ENST00000383948 107 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RNU6-13P-201ENST00000384248 107 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RNU6-12P-201ENST00000384604 107 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RNU6-41P-201ENST00000384741 107 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 U3.40-201ENST00000408706 208 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RNY4P30-201ENST00000410216 95 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AC096649.2-201ENST00000416186 393 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RN7SL594P-201ENST00000470590 287 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AC006445.1-201ENST00000491925 405 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RPS27AP10-201ENST00000496103 208 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 RN7SKP164-201ENST00000516138 266 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AP001328.1-201ENST00000528550 176 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 MIR4744-201ENST00000581563 82 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 MIR3945-201ENST00000581853 98 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 AL365361.1-201ENST00000566942 3481 ntBASIC3.63□□□□□ -1.83
LMCD1Q9NZU5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 RNU6-801P-201ENST00000364087 105 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 snoU2_19.4-201ENST00000364329 80 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 SNORA25.7-201ENST00000364375 127 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.337-201ENST00000365312 102 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 Y_RNA.572-201ENST00000384757 98 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 RPS26P42-201ENST00000413485 326 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AC009969.1-201ENST00000438726 172 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AC007215.1-201ENST00000464893 276 ntBASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.62□□□□□ -1.83
LMCD1Q9NZU5 RNU6-772P-201ENST00000516042 105 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms