Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 SNORA12.2-201ENST00000391040 156 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 MIR1262-201ENST00000408276 93 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AL445305.1-201ENST00000432577 575 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AL137159.1-201ENST00000452808 512 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AC097473.1-201ENST00000508142 408 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 RNU6-1098P-201ENST00000516772 96 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AL590705.4-201ENST00000532209 134 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 SNRPGP17-201ENST00000603780 214 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
NLGN3Q9NZ94 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RNY1P16-201ENST00000363063 111 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RNU6-611P-201ENST00000384276 104 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.509-201ENST00000384506 99 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 SNORA75.6-201ENST00000391318 127 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AF228730.4-201ENST00000421457 183 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RPL30P15-201ENST00000457129 321 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 PRELID3BP1-201ENST00000457142 540 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 SNORD19B-201ENST00000459623 84 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AC007215.1-201ENST00000464893 276 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AC104581.2-201ENST00000572227 430 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 C8orf59P2-201ENST00000603441 271 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AL355802.3-201ENST00000607571 545 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RMST_6.1-201ENST00000611980 203 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 AC084781.2-201ENST00000615568 161 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.87□□□□□ -2.11
NLGN3Q9NZ94 RNU4-79P-201ENST00000362764 141 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 SNORD115-8-201ENST00000363856 82 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.259-201ENST00000364619 101 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 SNORD115-38-201ENST00000365037 82 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 RNA5SP213-201ENST00000391031 106 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 MTCYBP4-201ENST00000401524 249 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 AL035666.1-201ENST00000446195 348 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 ELOCP24-201ENST00000456370 334 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.653-201ENST00000459091 95 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 RN7SKP210-201ENST00000459176 261 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 RPL23AP63-201ENST00000498752 471 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 RNU6-58P-201ENST00000517143 103 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 UBL5P4-201ENST00000562584 236 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 MIR5690-201ENST00000583739 73 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 ZNF702P-202ENST00000434269 1966 ntBASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NLGN3Q9NZ94 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 RNU6-222P-201ENST00000362438 107 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.319-201ENST00000365138 92 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 Y_RNA.384-201ENST00000383909 102 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MT-TD-201ENST00000387419 68 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 AL512604.1-201ENST00000404812 257 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MTND3P23-201ENST00000431980 347 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MTCO3P8-201ENST00000453691 755 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 RNU7-152P-201ENST00000458982 64 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 AP000870.1-201ENST00000472927 406 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 ANP32BP3-201ENST00000559213 706 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 AC005562.2-201ENST00000618264 111 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 ZNF204P-201ENST00000416749 2397 ntBASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NLGN3Q9NZ94 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 MIR340-201ENST00000362125 95 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 MIR559-201ENST00000385188 96 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 AC004386.2-201ENST00000441858 148 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 HMGN2P18-201ENST00000450680 270 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 AC022493.2-201ENST00000506122 481 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 AC093259.1-201ENST00000509755 300 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 MRPS17P9-201ENST00000511924 393 ntBASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.84□□□□□ -2.11
NLGN3Q9NZ94 RNU7-175P-201ENST00000515915 61 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms