Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL049781.1-201ENST00000623195 3585 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNU4-15P-201ENST00000362613 141 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 Y_RNA.52-201ENST00000362760 96 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-271P-201ENST00000363858 105 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 DYNLT3P1-201ENST00000378574 347 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-820P-201ENST00000384273 107 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 MIR624-201ENST00000385217 97 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 HLA-N-201ENST00000437516 135 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 AL021397.1-201ENST00000451806 248 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 AC099522.1-202ENST00000514718 367 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNA5SP281-201ENST00000516504 135 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-126P-201ENST00000516685 103 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 IFITM8P-201ENST00000522529 394 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-94P-201ENST00000607728 107 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 AC015726.2-201ENST00000620112 122 ntBASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
CUEDC1Q9NWM3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.49-201ENST00000362714 112 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-508P-201ENST00000363231 103 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.124-201ENST00000363339 93 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 RNA5SP283-201ENST00000365604 119 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 SNORD116-13-201ENST00000384408 92 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.528-201ENST00000384575 108 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 MIR586-201ENST00000385035 97 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 MIR1185-2-201ENST00000408687 86 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 AL117339.2-201ENST00000430475 180 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 RPS26P15-201ENST00000488067 348 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 SNORA18.4-201ENST00000516440 124 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 AL442128.1-201ENST00000615151 90 ntBASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CUEDC1Q9NWM3 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-1010P-201ENST00000362757 107 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.634-201ENST00000364811 113 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 MIR483-201ENST00000385070 76 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 MIR1263-201ENST00000408324 86 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RNA5SP127-201ENST00000411051 133 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 AL135786.1-201ENST00000415892 214 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RPL23AP46-201ENST00000438548 490 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 SNORD77.4-201ENST00000516158 81 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RN7SKP43-201ENST00000516173 320 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RN7SKP12-201ENST00000516275 143 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 CYP4A43P-201ENST00000568156 121 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 RN7SL600P-201ENST00000581811 299 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 AL049861.1-201ENST00000603130 150 ntBASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CUEDC1Q9NWM3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 MIR372-201ENST00000362225 67 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 SNORA71.3-201ENST00000362582 128 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.323-201ENST00000365157 109 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 RNU6-1014P-201ENST00000383940 103 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 MIR7-3-201ENST00000384898 110 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AL133475.1-201ENST00000404414 305 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AL121890.1-201ENST00000435457 205 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AF228730.3-201ENST00000436691 102 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AC023449.1-201ENST00000454464 154 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 RPS3P1-201ENST00000456781 192 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 RNA5SP246-201ENST00000458909 119 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 RPS26P55-201ENST00000471178 356 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 MRPS36P2-201ENST00000512569 299 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AC026726.1-201ENST00000512859 601 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 IGKV1-22-201ENST00000524313 326 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 AC105245.1-201ENST00000581934 244 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 MIR432-201ENST00000606207 94 ntBASIC4□□□□□ -1.77
CUEDC1Q9NWM3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4□□□□□ -1.77
CUEDC1Q9NWM3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 SNORA63.1-201ENST00000362493 131 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 SNORA27.1-201ENST00000362604 124 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 Y_RNA.220-201ENST00000364244 109 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.99□□□□□ -1.77
CUEDC1Q9NWM3 SNORA51.10-201ENST00000384418 136 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms