Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
RBM28Q9NW13 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.59□□□□□ -2.15
RBM28Q9NW13 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.59□□□□□ -2.15
RBM28Q9NW13 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.59□□□□□ -2.15
RBM28Q9NW13 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.59□□□□□ -2.15
RBM28Q9NW13 AL359697.1-201ENST00000624879 587 ntBASIC1.59□□□□□ -2.15
RBM28Q9NW13 MIR3688-2-201ENST00000636963 87 ntBASIC1.59□□□□□ -2.15
RBM28Q9NW13 AC245060.5-201ENST00000610778 3293 ntBASIC1.59□□□□□ -2.16
RBM28Q9NW13 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 MTND5P9-201ENST00000503854 1755 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 RNU6-784P-201ENST00000384330 106 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 RNU6-933P-201ENST00000384424 107 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 RNU6-1026P-201ENST00000384465 108 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 RNU6-306P-201ENST00000384617 107 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 Z82188.1-201ENST00000436709 154 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 RNU7-95P-201ENST00000459222 64 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 TRBVA-201ENST00000498804 316 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.58□□□□□ -2.16
RBM28Q9NW13 MIR3662-201ENST00000637030 95 ntBASIC1.58□□□□□ -2.16
RBM28Q9NW13 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.57□□□□□ -2.16
RBM28Q9NW13 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 RNU6-790P-201ENST00000384479 105 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 RNU6-831P-201ENST00000384548 107 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 MIR517A-201ENST00000385001 87 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
RBM28Q9NW13 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.57□□□□□ -2.16
RBM28Q9NW13 MTCO1P44-201ENST00000441935 243 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 MTCO3P8-201ENST00000453691 755 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 AC087477.1-201ENST00000465747 340 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 RPL23AP75-201ENST00000491601 451 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 AC025465.3-201ENST00000510570 311 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 AC011352.1-201ENST00000512300 793 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 RNU6-1088P-201ENST00000516850 104 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 RNU6-1314P-201ENST00000517139 104 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.57□□□□□ -2.16
RBM28Q9NW13 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 AC137590.2-201ENST00000619709 240 ntBASIC1.57□□□□□ -2.16
RBM28Q9NW13 Y_RNA.4-201ENST00000362333 112 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 RNU6-877P-201ENST00000383868 107 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 RNU6-418P-201ENST00000384035 107 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RBM28Q9NW13 AC004386.2-201ENST00000441858 148 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 PCMTD1P1-201ENST00000455560 355 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 AC097473.1-201ENST00000508142 408 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 MTND1P5-201ENST00000517906 940 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.56□□□□□ -2.16
RBM28Q9NW13 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.56□□□□□ -2.16
RBM28Q9NW13 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 AC005562.2-201ENST00000618264 111 ntBASIC1.56□□□□□ -2.16
RBM28Q9NW13 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RBM28Q9NW13 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 Y_RNA.132-201ENST00000363421 102 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 Y_RNA.164-201ENST00000363709 102 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 SNORD116-11-201ENST00000383882 92 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 Y_RNA.453-201ENST00000384223 109 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 ZNF885P-201ENST00000420174 1098 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RBM28Q9NW13 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 AL445305.1-201ENST00000432577 575 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 UBE2V1P8-201ENST00000437166 265 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 RPL31P58-201ENST00000469001 379 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 MTCO2P30-201ENST00000503662 364 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 AL359821.1-201ENST00000605519 182 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 U4.5-201ENST00000617137 123 ntBASIC1.55□□□□□ -2.16
RBM28Q9NW13 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.55□□□□□ -2.16
RBM28Q9NW13 Y_RNA.67-201ENST00000362870 100 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC099677.2-201ENST00000436385 175 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC016717.1-201ENST00000448918 286 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 OR2AQ1P-201ENST00000451972 200 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC007215.1-201ENST00000464893 276 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC069439.1-201ENST00000494739 167 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.54□□□□□ -2.16
RBM28Q9NW13 AC067942.3-201ENST00000512025 362 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
RBM28Q9NW13 RNU6-864P-201ENST00000516256 108 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms