Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 Y_RNA.673-201ENST00000516306 88 ntBASIC2.68□□□□□ -1.98
RLIMQ9NVW2 Y_RNA.680-201ENST00000516441 93 ntBASIC2.68□□□□□ -1.98
RLIMQ9NVW2 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
RLIMQ9NVW2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.68□□□□□ -1.98
RLIMQ9NVW2 AC008749.1-201ENST00000597650 306 ntBASIC2.68□□□□□ -1.98
RLIMQ9NVW2 AC037487.3-201ENST00000606668 112 ntBASIC2.68□□□□□ -1.98
RLIMQ9NVW2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
RLIMQ9NVW2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
RLIMQ9NVW2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
RLIMQ9NVW2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 RNU6-324P-201ENST00000363957 106 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 SNORD27-201ENST00000363981 72 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 Y_RNA.489-201ENST00000384410 101 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 MIR548B-201ENST00000385247 97 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 SNORA53-201ENST00000391141 249 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 MIR1283-1-201ENST00000408494 87 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 POLR2KP2-201ENST00000438155 177 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC005042.3-201ENST00000453230 174 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 HMGN2P9-201ENST00000476875 229 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 RNU6-966P-201ENST00000516479 104 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 RNU6-56P-201ENST00000516986 93 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 RNA5SP490-201ENST00000517141 136 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC022616.8-201ENST00000533569 253 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC018630.3-201ENST00000542637 96 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 MIR3944-201ENST00000581277 108 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 MIR3616-201ENST00000584070 92 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC092593.1-201ENST00000515413 1815 ntBASIC2.67□□□□□ -1.98
RLIMQ9NVW2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.67□□□□□ -1.98
RLIMQ9NVW2 AC092435.3-201ENST00000565538 3654 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 Y_RNA.60-201ENST00000362831 98 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 Y_RNA.446-201ENST00000384178 104 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 SNORA67.2-201ENST00000384300 149 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 Y_RNA.569-201ENST00000384749 103 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC104332.2-201ENST00000429959 156 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 MRPS10P1-201ENST00000448483 130 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 RNU6-991P-201ENST00000516168 107 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 RNU6-388P-201ENST00000517012 105 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 SNORA48.11-201ENST00000517015 89 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 RNU6-389P-201ENST00000517048 105 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC006380.1-201ENST00000603598 186 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC022441.3-201ENST00000605737 136 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC025754.2-201ENST00000606491 432 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC008873.1-201ENST00000625051 138 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 Z82209.1-201ENST00000422141 2135 ntBASIC2.66□□□□□ -1.98
RLIMQ9NVW2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RLIMQ9NVW2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.98
RLIMQ9NVW2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
RLIMQ9NVW2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MIR422A-201ENST00000362286 90 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 U3.8-201ENST00000363675 217 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 RNU6-379P-201ENST00000363813 104 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.383-201ENST00000383855 97 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 RNU6-514P-201ENST00000384208 107 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 SNORD14D-201ENST00000384390 87 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MIR586-201ENST00000385035 97 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MT-TG-201ENST00000387429 68 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MIR300-201ENST00000401138 83 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AL357139.1-201ENST00000407792 426 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 RPL19P1-201ENST00000411635 428 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC074290.1-201ENST00000448883 135 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MTND4LP30-201ENST00000454092 297 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.65□□□□□ -1.99
RLIMQ9NVW2 MIR3145-201ENST00000580727 82 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC010900.2-201ENST00000604508 210 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 AC091953.5-201ENST00000622919 233 ntBASIC2.65□□□□□ -1.99
RLIMQ9NVW2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RLIMQ9NVW2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
RLIMQ9NVW2 FAM35CP-201ENST00000554755 2470 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 SNORA25.1-201ENST00000362326 128 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 SNORA20.1-201ENST00000364790 130 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 MIR512-1-201ENST00000384913 84 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 MIR95-201ENST00000385072 81 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 AC003685.2-201ENST00000422795 395 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 TOMM22P2-201ENST00000430735 237 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 AC016717.1-201ENST00000448918 286 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 HMGN2P18-201ENST00000450680 270 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms