Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AL138963.2-201ENST00000605137 226 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 AL138880.2-201ENST00000616214 239 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 MTND5P35-201ENST00000557537 1720 ntBASIC3.94□□□□□ -1.78
ATG3Q9NT62 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATG3Q9NT62 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ATG3Q9NT62 SNORD56.1-201ENST00000362913 68 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 Y_RNA.172-201ENST00000363765 102 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 RNU4-10P-201ENST00000364383 140 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 MIR539-201ENST00000365690 78 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 Y_RNA.525-201ENST00000384570 113 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 Y_RNA.572-201ENST00000384757 98 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC022018.1-201ENST00000430685 241 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 RPS20P10-201ENST00000451209 253 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 RPS27P29-201ENST00000463110 252 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 SNORA31.1-201ENST00000515993 133 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 SNORA31.5-201ENST00000516190 133 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC093331.1-201ENST00000521474 169 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC021269.2-201ENST00000532318 330 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC016256.1-201ENST00000547971 354 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 HSPE1P4-201ENST00000550617 308 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 LINC00933-203ENST00000559812 219 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 MIR4744-201ENST00000581563 82 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC069294.1-201ENST00000608397 350 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC024581.2-201ENST00000619986 252 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG3Q9NT62 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG3Q9NT62 FAM35BP-202ENST00000497389 3337 ntBASIC3.93□□□□□ -1.78
ATG3Q9NT62 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG3Q9NT62 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC073325.2-201ENST00000339545 159 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 RNU6-801P-201ENST00000364087 105 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 Y_RNA.329-201ENST00000365209 107 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 Y_RNA.498-201ENST00000384460 102 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC009963.1-201ENST00000417265 157 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC112220.1-201ENST00000434628 355 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 GPM6BP3-201ENST00000442797 145 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG3Q9NT62 RNU6-928P-201ENST00000516876 104 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 RNA5SP170-201ENST00000517150 101 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.92□□□□□ -1.78
ATG3Q9NT62 MIR4319-201ENST00000577285 85 ntBASIC3.92□□□□□ -1.78
ATG3Q9NT62 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG3Q9NT62 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG3Q9NT62 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG3Q9NT62 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG3Q9NT62 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
ATG3Q9NT62 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-834P-201ENST00000362367 110 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-1285P-201ENST00000363480 105 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-270P-201ENST00000364131 105 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 SNORA18.3-201ENST00000384122 132 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU2-54P-201ENST00000410299 190 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-1245P-201ENST00000411130 106 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 AC105272.1-201ENST00000438604 198 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-1198P-201ENST00000516904 67 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 RNU6-711P-201ENST00000517255 106 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 MIR7153-201ENST00000637758 57 ntBASIC3.91□□□□□ -1.78
ATG3Q9NT62 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ATG3Q9NT62 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG3Q9NT62 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG3Q9NT62 AC062016.1-201ENST00000355719 319 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RNU6-1056P-201ENST00000383996 107 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 Y_RNA.563-201ENST00000384707 108 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 MIR544A-201ENST00000384855 91 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 SNORA26.5-201ENST00000391215 123 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RN7SKP284-201ENST00000411002 343 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 AC074117.2-201ENST00000417130 397 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 AL139281.1-201ENST00000422120 335 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RNU7-107P-201ENST00000459121 61 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 AC091179.3-201ENST00000474761 144 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 AC092185.1-201ENST00000491371 97 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 CYCTP-201ENST00000504253 315 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 SCARNA8-201ENST00000515924 131 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RNU6-436P-201ENST00000516171 114 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 RNU6-453P-201ENST00000516819 85 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 MIR3945-201ENST00000581853 98 ntBASIC3.9□□□□□ -1.79
ATG3Q9NT62 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
ATG3Q9NT62 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG3Q9NT62 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.9□□□□□ -1.79
ATG3Q9NT62 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
ATG3Q9NT62 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG3Q9NT62 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.9□□□□□ -1.79
ATG3Q9NT62 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ATG3Q9NT62 AC022336.2-201ENST00000568966 2538 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATG3Q9NT62 RNY1P11-201ENST00000363759 113 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 Y_RNA.179-201ENST00000363844 90 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 RNU6-217P-201ENST00000384164 104 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 RNA5SP252-201ENST00000391131 119 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 RNU6-460P-201ENST00000391158 108 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 RPL26P27-201ENST00000414397 437 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 AC074290.1-201ENST00000448883 135 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 AC107027.2-201ENST00000512197 115 ntBASIC3.89□□□□□ -1.79
ATG3Q9NT62 AP000867.2-201ENST00000532468 320 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms