Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC011712.1-201ENST00000588959 234 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL359821.1-201ENST00000605519 182 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AL133215.3-201ENST00000609801 448 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC022513.1-201ENST00000624512 117 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC099654.14-201ENST00000638599 341 ntBASIC1.7□□□□□ -2.14
HPS4Q9NQG7 AC006026.1-201ENST00000444025 1803 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.72-201ENST00000362894 103 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 RNU6-784P-201ENST00000384330 106 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 MTND3P8-201ENST00000412909 339 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 PDCL2P1-201ENST00000419302 352 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 MTND4LP16-201ENST00000440828 295 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 PRDX4P1-201ENST00000507189 574 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.682-201ENST00000516457 100 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 RNU6-566P-201ENST00000516790 107 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 RNA5SP454-201ENST00000517231 127 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 DEFB131C-201ENST00000528817 165 ntBASIC1.69□□□□□ -2.14
HPS4Q9NQG7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.69□□□□□ -2.14
HPS4Q9NQG7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HPS4Q9NQG7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.184-201ENST00000363884 108 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RNU6-767P-201ENST00000384132 107 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 MIR517A-201ENST00000385001 87 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RNU6-510P-201ENST00000391239 108 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RNA5SP100-201ENST00000410903 110 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RNA5SP59-201ENST00000410922 110 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RPS26P42-201ENST00000413485 326 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 AC138393.2-201ENST00000414742 246 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RPL21P111-201ENST00000418453 477 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 MTND1P17-201ENST00000448961 204 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.68□□□□□ -2.14
HPS4Q9NQG7 AF186996.7-201ENST00000492781 209 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 SNORA20.3-201ENST00000516880 132 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
HPS4Q9NQG7 MIR4790-201ENST00000577799 79 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 AC016727.2-201ENST00000603988 621 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 AC010900.2-201ENST00000604508 210 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 RBM11P1-201ENST00000604951 799 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.68□□□□□ -2.14
HPS4Q9NQG7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
HPS4Q9NQG7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HPS4Q9NQG7 RNU6-545P-201ENST00000362681 104 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 RNU6-1013P-201ENST00000384180 107 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 RNU6-790P-201ENST00000384479 105 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 MTCO1P44-201ENST00000441935 243 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.67□□□□□ -2.14
HPS4Q9NQG7 AC007395.1-201ENST00000451333 677 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 AC010531.2-201ENST00000465012 153 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 AL163540.1-201ENST00000485382 386 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 RNU7-30P-201ENST00000516835 62 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 SUB1P4-201ENST00000566062 339 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 AC005562.2-201ENST00000618264 111 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.67□□□□□ -2.14
HPS4Q9NQG7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
HPS4Q9NQG7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HPS4Q9NQG7 RNU6-845P-201ENST00000362578 103 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 RNU6-1059P-201ENST00000363752 98 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 Y_RNA.473-201ENST00000384333 102 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 MIR548F5-201ENST00000408421 86 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 PCMTD1P1-201ENST00000455560 355 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 HMGN1P12-201ENST00000499125 195 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 MTND5P5-201ENST00000503764 376 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AC103851.1-201ENST00000506833 274 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AC097473.1-201ENST00000508142 408 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.66□□□□□ -2.14
HPS4Q9NQG7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.66□□□□□ -2.14
HPS4Q9NQG7 MTND5P9-201ENST00000503854 1755 ntBASIC1.65□□□□□ -2.14
HPS4Q9NQG7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
HPS4Q9NQG7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
HPS4Q9NQG7 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 SNORD81.2-201ENST00000365153 76 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
HPS4Q9NQG7 MIR549A-201ENST00000385268 96 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms