Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNORA12-201ENST00000391162 147 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 MRPL35P1-201ENST00000404272 572 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 RNU6-121P-201ENST00000410525 99 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AC004866.1-201ENST00000411748 78 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AL731563.1-201ENST00000442202 214 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 TRBV12-1-201ENST00000479785 344 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 RPL26P26-201ENST00000480251 434 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 SNORA25.14-201ENST00000516481 132 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 RN7SKP40-201ENST00000517211 242 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
USP29Q9HBJ7 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 MIR4659A-201ENST00000580269 81 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.63□□□□□ -1.99
USP29Q9HBJ7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.63□□□□□ -1.99
USP29Q9HBJ7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP29Q9HBJ7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.62□□□□□ -1.99
USP29Q9HBJ7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.64-201ENST00000362845 102 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 MIR218-1-201ENST00000384999 110 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AL079342.1-201ENST00000401460 267 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 SNORD12B-201ENST00000410433 91 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC010095.1-201ENST00000443543 144 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC140059.1-201ENST00000489238 361 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC025465.3-201ENST00000510570 311 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AL161670.1-201ENST00000554348 137 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC010999.1-201ENST00000611856 324 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AL357075.2-201ENST00000614906 189 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 AC011476.5-201ENST00000615594 130 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
USP29Q9HBJ7 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
USP29Q9HBJ7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.61□□□□□ -1.99
USP29Q9HBJ7 RNA5SP181-201ENST00000410246 98 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.61□□□□□ -1.99
USP29Q9HBJ7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.61□□□□□ -1.99
USP29Q9HBJ7 LINC01399-202ENST00000458450 244 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 AC023824.2-201ENST00000566185 400 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 AC136932.1-201ENST00000574771 208 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 MIR3199-1-201ENST00000582434 88 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 MIR3149-201ENST00000584629 83 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 MZT1P2-201ENST00000604387 248 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 AC069294.1-201ENST00000608397 350 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 MIR8062-201ENST00000621515 85 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.61□□□□□ -1.99
USP29Q9HBJ7 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
USP29Q9HBJ7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.19-201ENST00000362462 99 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RNU6-926P-201ENST00000384075 107 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.439-201ENST00000384119 94 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 SNORA70B-201ENST00000384210 135 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RNU6-472P-201ENST00000384299 107 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 MIR29B2-201ENST00000385055 81 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 MIR1261-201ENST00000408659 82 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC007395.1-201ENST00000451333 677 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC091179.3-201ENST00000474761 144 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RNY3P15-201ENST00000516297 97 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC026470.2-201ENST00000561492 181 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC105245.1-201ENST00000581934 244 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC090616.3-201ENST00000582184 217 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 SNRPGP20-201ENST00000604477 205 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC005562.2-201ENST00000618264 111 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 U4.1-201ENST00000620349 87 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AC130454.1-201ENST00000622948 401 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 AP006437.1-201ENST00000641440 3685 ntBASIC2.6□□□□□ -1.99
USP29Q9HBJ7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
USP29Q9HBJ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USP29Q9HBJ7 RNU1-62P-201ENST00000362599 164 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 RNU6-944P-201ENST00000364023 107 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 SNORA67.4-201ENST00000384688 142 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 SNORD115-46-201ENST00000390982 71 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 AC027124.2-201ENST00000428249 105 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 AC090515.1-201ENST00000465295 476 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.59□□□□□ -1.99
USP29Q9HBJ7 AC023141.11-201ENST00000508864 202 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 RNU6-1143P-201ENST00000516125 104 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 SNORA40.15-201ENST00000516884 107 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 AC004817.2-201ENST00000561794 651 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 TCL6_2.1-201ENST00000615162 119 ntBASIC2.59□□□□□ -1.99
USP29Q9HBJ7 MTND5P35-201ENST00000557537 1720 ntBASIC2.59□□□□□ -2
USP29Q9HBJ7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.58□□□□□ -2
USP29Q9HBJ7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.143-201ENST00000363520 106 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNU5F-3P-201ENST00000363767 117 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms