Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL133255.1-201ENST00000606374 441 ntBASIC2.18□□□□□ -2.06
BRF2Q9HAW0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
BRF2Q9HAW0 AC090574.1-201ENST00000623186 233 ntBASIC2.18□□□□□ -2.06
BRF2Q9HAW0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
BRF2Q9HAW0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 MIR586-201ENST00000385035 97 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 MIR559-201ENST00000385188 96 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AC096638.1-201ENST00000444678 216 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 SNORD116.3-201ENST00000517176 78 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 MIR4287-201ENST00000579398 78 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AC013412.1-201ENST00000610687 192 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
BRF2Q9HAW0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
BRF2Q9HAW0 SNORD114-6-201ENST00000364393 72 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 RNU6-418P-201ENST00000384035 107 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 Y_RNA.419-201ENST00000384041 102 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 RNU6-281P-201ENST00000384212 103 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 Y_RNA.460-201ENST00000384255 102 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 Y_RNA.509-201ENST00000384506 99 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 MIR597-201ENST00000384968 97 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 MIR1283-2-201ENST00000408621 87 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.16□□□□□ -2.06
BRF2Q9HAW0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 HMGN2P3-201ENST00000433603 273 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 HMGN2P5-201ENST00000436882 273 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.16□□□□□ -2.06
BRF2Q9HAW0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AP001486.1-201ENST00000463339 476 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AC091179.3-201ENST00000474761 144 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 Y_RNA.683-201ENST00000516508 93 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 RNU6-107P-201ENST00000516643 102 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AL590240.4-201ENST00000616908 390 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AC008873.1-201ENST00000625051 138 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AC243829.7-201ENST00000633081 225 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AL136360.1-201ENST00000503377 1900 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 MTND5P35-201ENST00000557537 1720 ntBASIC2.16□□□□□ -2.06
BRF2Q9HAW0 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 RNA5SP493-201ENST00000364115 91 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.463-201ENST00000384271 102 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.595-201ENST00000410403 105 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AF228730.4-201ENST00000421457 183 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 EIF1P2-201ENST00000428233 350 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AC010095.1-201ENST00000443543 144 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.15□□□□□ -2.07
BRF2Q9HAW0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
BRF2Q9HAW0 HMGN2P9-201ENST00000476875 229 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
BRF2Q9HAW0 RNU6-976P-201ENST00000516086 111 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 RNU6-948P-201ENST00000516374 107 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 MIR2355-201ENST00000517199 87 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AC090971.5-201ENST00000621102 293 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AC068205.3-201ENST00000636385 468 ntBASIC2.15□□□□□ -2.07
BRF2Q9HAW0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
BRF2Q9HAW0 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 RNY3P11-201ENST00000364153 102 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 SNORD87-201ENST00000364849 89 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 Y_RNA.592-201ENST00000410274 109 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.14□□□□□ -2.07
BRF2Q9HAW0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.14□□□□□ -2.07
BRF2Q9HAW0 U8.22-201ENST00000459141 133 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 HMGN1P13-201ENST00000505795 138 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 AC067942.3-201ENST00000512025 362 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 SUMO2P18-201ENST00000518873 252 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 MIR3169-201ENST00000578032 83 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 MZT1P2-201ENST00000604387 248 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
BRF2Q9HAW0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
BRF2Q9HAW0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
BRF2Q9HAW0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 MTND4P28-201ENST00000426217 387 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 MTCO1P44-201ENST00000441935 243 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 UQCRBP2-201ENST00000447827 297 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.13□□□□□ -2.07
BRF2Q9HAW0 RNU6-498P-201ENST00000459468 107 ntBASIC2.13□□□□□ -2.07
BRF2Q9HAW0 RNU7-57P-201ENST00000459540 60 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms