Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MIR3976-201ENST00000606807 139 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MTND5P9-201ENST00000503854 1755 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 U8.1-201ENST00000362843 134 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNU1-76P-201ENST00000362903 159 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 SNORA29-201ENST00000384183 140 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNY3P14-201ENST00000384309 102 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNU6-790P-201ENST00000384479 105 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MIR517A-201ENST00000385001 87 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AL356776.1-201ENST00000406574 447 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNU2-41P-201ENST00000410991 178 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MTCO3P46-201ENST00000425787 232 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MTND1P2-201ENST00000430604 821 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 SNRPEP8-201ENST00000442866 260 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MTND1P17-201ENST00000448961 204 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AC087477.1-201ENST00000465747 340 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 MTCO2P30-201ENST00000503662 364 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNU6-566P-201ENST00000516790 107 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 RNU6-273P-201ENST00000516937 96 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 AC245060.5-201ENST00000610778 3293 ntBASIC1.63□□□□□ -2.15
CCSER1Q9C0I3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RNU6-414P-201ENST00000363705 104 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RNU1-42P-201ENST00000364033 160 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RNU6-968P-201ENST00000384076 107 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RNU6-378P-201ENST00000384324 107 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 FGF7P8-201ENST00000402994 292 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 RN7SKP51-201ENST00000410781 304 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC139712.2-201ENST00000424302 339 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AL353572.1-201ENST00000442490 417 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC016925.1-201ENST00000458303 298 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC097473.1-201ENST00000508142 408 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC090517.1-201ENST00000569307 266 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 MIR4742-201ENST00000581069 85 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC011712.1-201ENST00000588959 234 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC124303.1-201ENST00000605703 360 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC009994.1-201ENST00000606889 253 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AC019193.3-201ENST00000609144 554 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 AL133216.2-202ENST00000634512 349 ntBASIC1.62□□□□□ -2.15
CCSER1Q9C0I3 CASC19-280ENST00000642102 1351 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 SNORD50.1-201ENST00000362987 71 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 MTND3P8-201ENST00000412909 339 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 AP1B1P2-201ENST00000416196 106 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 MTCO1P44-201ENST00000441935 243 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 ATP5EP1-201ENST00000510257 156 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 SNORA31.17-201ENST00000516953 127 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 MRPS36P4-201ENST00000534436 298 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 POLR3GP2-201ENST00000588366 668 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 MTND5P10-201ENST00000603719 1809 ntBASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.61□□□□□ -2.15
CCSER1Q9C0I3 MIR300-201ENST00000401138 83 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 RNA5SP494-201ENST00000410653 129 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 RPS26P42-201ENST00000413485 326 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 BTF3P4-201ENST00000418852 495 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AL139396.1-201ENST00000421137 167 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC079354.2-201ENST00000453523 154 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 snoU13.9-201ENST00000458927 103 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 TOMM22P6-201ENST00000465035 409 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 RPL36AP21-201ENST00000490372 323 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC046134.1-201ENST00000514454 666 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 ACA59.1-201ENST00000515966 143 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 MIR4790-201ENST00000577799 79 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 MIR5094-201ENST00000578766 85 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AC069114.2-201ENST00000604699 304 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms