Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MTATP6P3-201ENST00000581686 676 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AC025449.1-201ENST00000603896 529 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 SNRPGP20-201ENST00000604477 205 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AC080078.3-201ENST00000605407 463 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AC064836.2-201ENST00000609491 462 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 MIR6835-201ENST00000621552 64 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 ZNF204P-201ENST00000416749 2397 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
NKX6-2Q9C056 MIR450B-201ENST00000401182 78 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AL451046.2-201ENST00000403074 277 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 MTCYBP8-201ENST00000422855 651 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 CYCSP46-201ENST00000423569 204 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AC092473.1-201ENST00000441098 221 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 HSFY5P-201ENST00000453726 309 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 U8.21-201ENST00000459536 136 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 RNU6-221P-201ENST00000459541 99 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AL163540.1-201ENST00000485382 386 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AC005840.1-201ENST00000498412 377 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AC108210.2-201ENST00000503681 201 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 CCDC34P1-201ENST00000507441 517 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 RNU6-917P-201ENST00000516294 104 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
NKX6-2Q9C056 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
NKX6-2Q9C056 FER-210ENST00000628534 558 ntTSL 5 BASIC0.47□□□□□ -2.33
NKX6-2Q9C056 OR4G1P-203ENST00000641984 1631 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 Y_RNA.201-201ENST00000364052 96 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 Y_RNA.327-201ENST00000365201 102 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 MIR764-201ENST00000390811 85 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 SNORA75.2-201ENST00000391138 150 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 SNORA75.3-201ENST00000391231 150 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AL031577.2-201ENST00000404133 280 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 RNA5SP504-201ENST00000410676 117 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 RPL39P39-201ENST00000455840 151 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 snoU13.23-201ENST00000458863 104 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 RNU6-232P-201ENST00000517144 64 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.46□□□□□ -2.34
NKX6-2Q9C056 AC090049.2-201ENST00000550377 109 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 BNIP3P10-201ENST00000605360 577 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 uc_338.34-201ENST00000617467 174 ntBASIC0.46□□□□□ -2.34
NKX6-2Q9C056 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 RNU6-553P-201ENST00000364047 96 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 RNU6-517P-201ENST00000384362 110 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 MIR653-201ENST00000385279 96 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 RPEP5-201ENST00000441137 268 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 TPT1P7-201ENST00000458300 517 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 RNU7-180P-201ENST00000459240 63 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 SNORD42A-201ENST00000459584 64 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC007215.1-201ENST00000464893 276 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 BET1P1-201ENST00000482276 359 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 SCARNA1-201ENST00000517138 166 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.45□□□□□ -2.34
NKX6-2Q9C056 APOOP3-201ENST00000536787 586 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC004584.2-201ENST00000570407 410 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 MIR3973-201ENST00000579824 107 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 MIR4781-201ENST00000585250 76 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AL353765.1-201ENST00000605514 183 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC016597.2-201ENST00000613256 341 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 AC137590.2-201ENST00000619709 240 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 OR5AK4P-201ENST00000635912 903 ntBASIC0.45□□□□□ -2.34
NKX6-2Q9C056 RNU6-53P-201ENST00000365367 106 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 RNU6-1335P-201ENST00000365426 107 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 SNORD116-13-201ENST00000384408 92 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 MIR320B2-201ENST00000408479 138 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 RNU6-248P-201ENST00000410720 107 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 CALM2P4-201ENST00000430810 426 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AL358934.1-201ENST00000432346 324 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 RNU7-21P-201ENST00000459430 62 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 RNU6-344P-201ENST00000516635 111 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AC060788.1-201ENST00000521318 469 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AC007834.2-201ENST00000536310 343 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AL137100.2-201ENST00000555786 315 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 MIR3913-1-201ENST00000577744 102 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.44□□□□□ -2.34
NKX6-2Q9C056 AC245884.10-201ENST00000597355 337 ntBASIC0.44□□□□□ -2.34
NKX6-2Q9C056 SNORD11B-201ENST00000607707 90 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms