Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RNU2-54P-201ENST00000410299 190 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 AC114982.1-201ENST00000469402 321 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RPS29P26-201ENST00000477483 171 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RNU6-1271P-201ENST00000517049 105 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 RNU6-667P-201ENST00000517186 102 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 AL590240.4-201ENST00000616908 390 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 SDR42E1P4-201ENST00000620894 481 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM55Q9BYV6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 AL391987.6-201ENST00000305671 199 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 MIR335-201ENST00000362173 94 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RNA5SP374-201ENST00000362939 125 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 SNORD56.5-201ENST00000364281 72 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.350-201ENST00000365409 98 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 SNORA25B-201ENST00000365507 128 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 Y_RNA.562-201ENST00000384695 113 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RNA5SP344-201ENST00000411081 104 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RNU6-1199P-201ENST00000411249 104 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RPL19P1-201ENST00000411635 428 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 SRIP1-201ENST00000489235 288 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RNU6-155P-201ENST00000516347 100 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 RNU2-12P-201ENST00000517216 168 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 AC012433.1-201ENST00000588916 398 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 U4atac.1-201ENST00000618345 95 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 MTND5P6-201ENST00000422338 1798 ntBASIC3.22□□□□□ -1.89
TRIM55Q9BYV6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.447-201ENST00000384184 113 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 RNU6-975P-201ENST00000384296 105 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 MIR1185-2-201ENST00000408687 86 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC009963.1-201ENST00000417265 157 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC074290.1-201ENST00000448883 135 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 RNU7-57P-201ENST00000459540 60 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 RPL39P38-201ENST00000467018 153 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 RNU6-991P-201ENST00000516168 107 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC008749.1-201ENST00000597650 306 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 AC135776.4-201ENST00000624300 1904 ntBASIC3.21□□□□□ -1.9
TRIM55Q9BYV6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 RNU1-70P-201ENST00000362618 164 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AC139712.2-201ENST00000424302 339 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AL137159.1-201ENST00000452808 512 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 MIR5680-201ENST00000577577 84 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 AC006380.1-201ENST00000603598 186 ntBASIC3.2□□□□□ -1.9
TRIM55Q9BYV6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.383-201ENST00000383855 97 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.569-201ENST00000384749 103 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 POLR2KP2-201ENST00000438155 177 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC009238.1-201ENST00000442165 424 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC009237.6-201ENST00000446969 424 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC016717.1-201ENST00000448918 286 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC093259.1-201ENST00000509755 300 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.680-201ENST00000516441 93 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 SCARNA24.2-201ENST00000516968 130 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 AC025754.2-201ENST00000606491 432 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 snoZ196.1-201ENST00000625269 89 ntBASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TRIM55Q9BYV6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.332-201ENST00000365271 113 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 RNU6-1318P-201ENST00000365389 103 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 SNORA53-201ENST00000391141 249 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 MRPS10P1-201ENST00000448483 130 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms