Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC099654.7-201ENST00000635788 2127 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 SNORD56.1-201ENST00000362913 68 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RNU6-879P-201ENST00000364328 108 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RNU6-487P-201ENST00000365430 104 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 DEFA7P-201ENST00000382676 285 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RNU6-1145P-201ENST00000384246 107 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 U8.10-201ENST00000384260 133 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RNU6-886P-201ENST00000384319 105 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.504-201ENST00000384481 104 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.506-201ENST00000384494 102 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 MIR1298-201ENST00000408783 112 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RNU2-20P-201ENST00000410425 191 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 SNORD12B-201ENST00000410433 91 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC005002.2-201ENST00000438228 269 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC104332.1-201ENST00000440471 797 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 COX6CP14-201ENST00000469580 174 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 MRPL42P6-201ENST00000486397 371 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 RPS27AP10-201ENST00000496103 208 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 SNORA31.23-201ENST00000517219 133 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC009163.5-201ENST00000575421 637 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 MIR4643-201ENST00000577473 78 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 MIR4769-201ENST00000584126 77 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC020895.1-201ENST00000595362 272 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC008739.2-201ENST00000597006 317 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC011476.5-201ENST00000615594 130 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC005296.1-201ENST00000616145 209 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 U4.3-201ENST00000621047 82 ntBASIC2.98□□□□□ -1.93
SALL3Q9BXA9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.98□□□□□ -1.93
SALL3Q9BXA9 AC092268.1-201ENST00000342691 405 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.83-201ENST00000363005 113 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.270-201ENST00000364693 104 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.464-201ENST00000384282 110 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 RNU6-541P-201ENST00000384709 110 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 MIR10B-201ENST00000385011 110 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 SNORA53-201ENST00000391141 249 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 FTH1P15-201ENST00000406984 280 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 MTCO1P5-201ENST00000433573 344 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.644-201ENST00000459006 113 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.674-201ENST00000516362 113 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 SCARNA24.2-201ENST00000516968 130 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 RNU6-58P-201ENST00000517143 103 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 AC021739.1-201ENST00000559631 174 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 AL356575.1-201ENST00000603008 283 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.97□□□□□ -1.93
SALL3Q9BXA9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SALL3Q9BXA9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 SNORD50B-201ENST00000364995 70 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 SNORA70B-201ENST00000384210 135 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RNU6-102P-201ENST00000384485 104 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 MIR329-1-201ENST00000385028 80 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RPS26P42-201ENST00000413485 326 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.96□□□□□ -1.93
SALL3Q9BXA9 BPY2DP-201ENST00000422208 265 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RPL26P26-201ENST00000480251 434 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RNA5SP54-201ENST00000516951 92 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 RNU2-31P-201ENST00000516954 155 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 CYCSP23-201ENST00000519781 313 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 CBX3P4-201ENST00000538909 354 ntBASIC2.96□□□□□ -1.93
SALL3Q9BXA9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.96□□□□□ -1.94
SALL3Q9BXA9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SALL3Q9BXA9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SALL3Q9BXA9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SALL3Q9BXA9 AC110491.1-201ENST00000562191 2010 ntBASIC2.96□□□□□ -1.94
SALL3Q9BXA9 Y_RNA.44-201ENST00000362676 108 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 RNU6-1290P-201ENST00000362957 109 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 Y_RNA.199-201ENST00000364014 102 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 RNU6-378P-201ENST00000384324 107 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 MIR544A-201ENST00000384855 91 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 SNORA26.3-201ENST00000391119 136 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.95□□□□□ -1.94
SALL3Q9BXA9 RNU6-735P-201ENST00000410612 107 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AC099548.1-201ENST00000421443 426 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 WARS2P1-201ENST00000429678 537 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AC104332.2-201ENST00000429959 156 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AC018634.1-201ENST00000437554 401 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 GPM6BP3-201ENST00000442797 145 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 RNU7-120P-201ENST00000459334 63 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AC073901.1-201ENST00000462471 408 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 AP001025.1-201ENST00000486139 332 ntBASIC2.95□□□□□ -1.94
SALL3Q9BXA9 RNU6-56P-201ENST00000516986 93 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms