Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 RNU6-47P-201ENST00000383866 107 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 RNU6-1199P-201ENST00000411249 104 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 COX6CP10-201ENST00000416832 224 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 AC025750.2-201ENST00000442609 450 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 Y_RNA.638-201ENST00000459374 113 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 UBE2DNL-203ENST00000474922 222 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 AC008739.2-201ENST00000597006 317 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 RPL30P11-203ENST00000598995 310 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 AL137790.1-201ENST00000634283 177 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.91□□□□□ -1.94
NDC1Q9BTX1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.91□□□□□ -1.94
NDC1Q9BTX1 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.94
NDC1Q9BTX1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.94
NDC1Q9BTX1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 RNU6-545P-201ENST00000362681 104 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.415-201ENST00000384012 112 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC004866.1-201ENST00000411748 78 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC027124.2-201ENST00000428249 105 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 RNU6-155P-201ENST00000516347 100 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC087441.2-201ENST00000529141 262 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.9□□□□□ -1.95
NDC1Q9BTX1 MIR3145-201ENST00000580727 82 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 MIR4513-201ENST00000581077 86 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC005828.6-201ENST00000606610 232 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC093732.2-201ENST00000607950 274 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 MIR7106-201ENST00000612419 65 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 AC005562.2-201ENST00000618264 111 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 MIR3674-201ENST00000636576 68 ntBASIC2.9□□□□□ -1.95
NDC1Q9BTX1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RNU4-80P-201ENST00000363200 141 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RNU6-682P-201ENST00000363843 106 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 SNORA80A-201ENST00000363922 136 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 SNORA44-201ENST00000384584 132 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RNU2-54P-201ENST00000410299 190 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RNA5SP475-201ENST00000410568 110 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.89□□□□□ -1.95
NDC1Q9BTX1 SNORD2.1-201ENST00000458762 69 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 AC091179.1-201ENST00000461606 579 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RPL23AP94-201ENST00000512518 302 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 RNU6-861P-201ENST00000516745 106 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 HSPE1P18-201ENST00000517602 280 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 AC022559.1-201ENST00000520905 205 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 DEFB131C-201ENST00000528817 165 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 MIR4298-201ENST00000584380 73 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
NDC1Q9BTX1 TCL6_2.1-201ENST00000615162 119 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.89□□□□□ -1.95
NDC1Q9BTX1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.89□□□□□ -1.95
NDC1Q9BTX1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NDC1Q9BTX1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RNU6-774P-201ENST00000363238 107 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RNU6-1020P-201ENST00000363684 107 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.217-201ENST00000364214 105 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.464-201ENST00000384282 110 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 MIR29B2-201ENST00000385055 81 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RNU6-493P-201ENST00000391321 108 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC004386.2-201ENST00000441858 148 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.641-201ENST00000459414 105 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RPS29P12-201ENST00000460178 152 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC092185.1-201ENST00000491371 97 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 RNU6-107P-201ENST00000516643 102 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC107016.2-201ENST00000547968 190 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC073349.3-201ENST00000617616 186 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AC103988.1-201ENST00000566382 2177 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 AP003122.5-201ENST00000527668 3766 ntBASIC2.88□□□□□ -1.95
NDC1Q9BTX1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NDC1Q9BTX1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NDC1Q9BTX1 SNORD87-201ENST00000364849 89 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 SNORA18.2-201ENST00000383865 132 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AC009963.1-201ENST00000417265 157 ntBASIC2.87□□□□□ -1.95
NDC1Q9BTX1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms