Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 SCARNA4-201ENST00000629045 128 ntBASIC1.02□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR3688-2-201ENST00000636963 87 ntBASIC1.02□□□□□ -2.25
SHANK2-AS3Q9BTD1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SHANK2-AS3Q9BTD1 BX322639.1-202ENST00000423987 2213 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MTND4P5-201ENST00000435821 1374 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-418P-201ENST00000384035 107 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-360P-201ENST00000390944 104 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR300-201ENST00000401138 83 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR1289-2-201ENST00000408360 111 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR1267-201ENST00000408723 78 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC015922.2-201ENST00000435593 184 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 Z82188.1-201ENST00000436709 154 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC004386.2-201ENST00000441858 148 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC009237.7-201ENST00000447357 229 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MTCO2P30-201ENST00000503662 364 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC091435.1-201ENST00000505442 584 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC011352.1-201ENST00000512300 793 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 Y_RNA.655-201ENST00000515919 96 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNA5SP458-201ENST00000516188 119 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-1314P-201ENST00000517139 104 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 SUMO2P18-201ENST00000518873 252 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC026470.2-201ENST00000561492 181 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR5696-201ENST00000578474 85 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC146944.4-201ENST00000602697 718 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 U4.5-201ENST00000617137 123 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 AL159152.1-201ENST00000635019 2587 ntBASIC1.01□□□□□ -2.25
SHANK2-AS3Q9BTD1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR302D-201ENST00000362275 68 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-862P-201ENST00000362804 105 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 SNORA63D-201ENST00000364359 132 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-975P-201ENST00000384296 105 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-373P-201ENST00000411247 98 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 DAP3P1-201ENST00000441522 278 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU1-123P-201ENST00000458950 160 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 Y_RNA.638-201ENST00000459374 113 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RPL31P58-201ENST00000469001 379 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RPS26P55-201ENST00000471178 356 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC099513.1-201ENST00000490423 301 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNA5SP445-201ENST00000515889 115 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNA5SP384-201ENST00000516615 116 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-902P-201ENST00000517212 91 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AK6P2-201ENST00000549020 471 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 RRN3P3-201ENST00000549207 578 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 SUB1P3-201ENST00000564581 315 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AP000907.4-201ENST00000604143 237 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AL353149.1-201ENST00000610667 244 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC245060.5-201ENST00000610778 3293 ntBASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1□□□□□ -2.25
SHANK2-AS3Q9BTD1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNA5SP99-201ENST00000364020 114 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 SNORD115-32-201ENST00000364079 82 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 SNORD1A-201ENST00000364968 72 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-596P-201ENST00000365395 98 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU6-877P-201ENST00000383868 107 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR520A-201ENST00000384862 85 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR517A-201ENST00000385001 87 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR586-201ENST00000385035 97 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR548F1-201ENST00000408667 84 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 HSPE1P9-201ENST00000440046 311 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC016717.1-201ENST00000448918 286 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MTND1P17-201ENST00000448961 204 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 PCMTD1P1-201ENST00000455560 355 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNU2-34P-201ENST00000516534 121 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 RNA5SP437-201ENST00000517249 129 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AP003033.1-201ENST00000527244 415 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC027288.2-201ENST00000553028 243 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR5006-201ENST00000583027 110 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC008873.1-201ENST00000625051 138 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 MIR338-201ENST00000636369 67 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 ZNF209P-201ENST00000593450 2304 ntBASIC0.99□□□□□ -2.25
SHANK2-AS3Q9BTD1 AC091812.1-201ENST00000432235 1948 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms