Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SNORA31.10-201ENST00000516482 106 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 MIR5583-1-201ENST00000580941 59 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AL513534.2-201ENST00000603836 250 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AC108706.1-201ENST00000611053 297 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AL050303.3-201ENST00000613704 284 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 AL078596.1-201ENST00000624856 447 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 snoZ196.1-201ENST00000625269 89 ntBASIC0.61□□□□□ -2.31
UPK3BQ9BT76 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
UPK3BQ9BT76 MIR373-201ENST00000362273 69 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MIR520E-201ENST00000384867 87 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 RNU6-910P-201ENST00000390844 107 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 RNA5SP219-201ENST00000390940 113 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MTATP6P18-201ENST00000417994 673 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 AL365203.2-201ENST00000423444 196 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 AL606517.2-201ENST00000442855 241 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.6□□□□□ -2.31
UPK3BQ9BT76 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.6□□□□□ -2.31
UPK3BQ9BT76 SNORA31.2-201ENST00000516019 134 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 SNORA14.1-201ENST00000516113 141 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK3BQ9BT76 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.6□□□□□ -2.31
UPK3BQ9BT76 FGF7P1-201ENST00000582820 288 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MIR151B-201ENST00000584249 96 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 uc_338.34-201ENST00000617467 174 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MIR6788-201ENST00000618842 66 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 MIR8054-201ENST00000620877 86 ntBASIC0.6□□□□□ -2.31
UPK3BQ9BT76 RNU4-79P-201ENST00000362764 141 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 Y_RNA.123-201ENST00000363338 102 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 SNORD114-24-201ENST00000365029 72 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 RNU6-440P-201ENST00000390882 105 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AL034345.1-201ENST00000407768 123 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC004866.1-201ENST00000411748 78 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.59□□□□□ -2.31
UPK3BQ9BT76 MTCYBP8-201ENST00000422855 651 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC004941.2-201ENST00000427009 228 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 MTCO2P11-201ENST00000431069 680 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 RNU7-63P-201ENST00000459054 62 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 RNU7-180P-201ENST00000459240 63 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC048334.1-201ENST00000477975 159 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC025647.1-201ENST00000517879 253 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC087854.1-201ENST00000519706 414 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 MRPS36P4-201ENST00000534436 298 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 MIR3913-1-201ENST00000577744 102 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC008088.1-201ENST00000580993 280 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC022217.4-201ENST00000604389 163 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 FAM71BP1-201ENST00000604431 523 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 AC137590.2-201ENST00000619709 240 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 SNORD3E-202ENST00000627253 216 ntBASIC0.59□□□□□ -2.31
UPK3BQ9BT76 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
UPK3BQ9BT76 RNY1P14-201ENST00000384426 108 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 MIR100-201ENST00000385259 80 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 SNORD12-201ENST00000391002 90 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
UPK3BQ9BT76 MRPL42P3-201ENST00000401492 326 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 RNU6-1054P-201ENST00000411293 104 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC063976.4-201ENST00000421971 163 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.58□□□□□ -2.32
UPK3BQ9BT76 RPS4XP11-201ENST00000446897 772 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 MTND1P27-201ENST00000451117 902 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 SRRM1P2-201ENST00000464531 1192 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC092991.1-201ENST00000477176 376 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.58□□□□□ -2.32
UPK3BQ9BT76 RNA5SP220-201ENST00000516298 104 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 RNU6-922P-201ENST00000516753 99 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 CBX3P8-201ENST00000532412 525 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC025423.5-201ENST00000550230 219 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 MIR3973-201ENST00000579824 107 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AL162424.1-201ENST00000602325 221 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC068790.6-201ENST00000602558 258 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AL078603.1-201ENST00000603824 313 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AL136370.1-201ENST00000608166 691 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC064836.2-201ENST00000609491 462 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 GHRLOS.1-201ENST00000610995 70 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 RMST_3.1-201ENST00000611651 109 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 HULC.1-201ENST00000612720 240 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AL513423.1-201ENST00000621695 132 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC106754.2-201ENST00000623006 233 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 AC005609.4-201ENST00000625071 447 ntBASIC0.58□□□□□ -2.32
UPK3BQ9BT76 HSBP1P2-201ENST00000299671 229 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 SNORD114-2-201ENST00000363953 78 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU4-76P-201ENST00000364509 141 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU6-1317P-201ENST00000364582 104 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 SNORA72.3-201ENST00000365074 132 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU6-996P-201ENST00000365438 107 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 SNORA67.2-201ENST00000384300 149 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AL606923.1-201ENST00000406616 190 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU6-1186P-201ENST00000410429 97 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 RNU2-64P-201ENST00000411315 191 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC006461.1-201ENST00000412637 326 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC016909.1-201ENST00000415916 166 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC245047.3-201ENST00000429428 127 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AL358934.1-201ENST00000432346 324 ntBASIC0.57□□□□□ -2.32
UPK3BQ9BT76 AC002429.1-201ENST00000437672 148 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms