Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC093019.1-201ENST00000443135 252 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AP000870.1-201ENST00000472927 406 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RN7SL429P-201ENST00000479090 223 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RN7SL489P-201ENST00000486185 223 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RN7SL327P-201ENST00000488659 223 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 HMGN1P13-201ENST00000505795 138 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AC093303.1-201ENST00000514549 295 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 SNORA31.11-201ENST00000516528 139 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RNA5SP384-201ENST00000516615 116 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 UBL5P4-201ENST00000562584 236 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 MIR5690-201ENST00000583739 73 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 MIR4298-201ENST00000584380 73 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AC005014.2-201ENST00000607795 599 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 RN7SL853P-201ENST00000617250 223 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.36□□□□□ -2.03
HERPUD2Q9BSE4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 SNORA63C-201ENST00000364578 129 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.404-201ENST00000383978 102 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-975P-201ENST00000384296 105 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 RNU4-53P-201ENST00000410828 140 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-370P-201ENST00000411008 104 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AL356379.1-201ENST00000414105 126 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AF228730.4-201ENST00000421457 183 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 MTND2P23-201ENST00000422990 651 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 MTCYBP10-201ENST00000424905 650 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 USP9YP16-201ENST00000430287 407 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 USP9YP23-201ENST00000455085 407 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 HMGN2P9-201ENST00000476875 229 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC097473.1-201ENST00000508142 408 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC008413.1-201ENST00000511864 177 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC105029.1-201ENST00000520250 669 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC091544.4-201ENST00000555268 342 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 MIR4299-201ENST00000577899 72 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AL360085.1-201ENST00000604713 532 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AL133255.1-201ENST00000606374 441 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC116312.1-201ENST00000606841 314 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AL160413.1-201ENST00000622780 310 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 AC064859.1-201ENST00000624741 174 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.35□□□□□ -2.03
HERPUD2Q9BSE4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AC244636.1-201ENST00000421152 228 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AC016717.1-201ENST00000448918 286 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 RNU6-498P-201ENST00000459468 107 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 RNU7-57P-201ENST00000459540 60 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 Y_RNA.675-201ENST00000516389 149 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 SCARNA16.2-201ENST00000516520 172 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL355375.2-201ENST00000574825 175 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 MIR5701-3-201ENST00000578890 82 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 MIR5695-201ENST00000579717 85 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 MIR5701-1-201ENST00000585138 82 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AC113139.1-201ENST00000605049 239 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL162730.1-201ENST00000605734 292 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 MIR5701-2-201ENST00000615634 82 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 AL669831.3-213ENST00000636676 183 ntBASIC2.34□□□□□ -2.03
HERPUD2Q9BSE4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.106-201ENST00000363189 100 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.216-201ENST00000364205 93 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-474P-201ENST00000384243 107 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 MIR190B-201ENST00000401119 79 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 RNU4-14P-201ENST00000410858 122 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AC007098.1-201ENST00000420122 367 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 MTND4P19-201ENST00000446659 478 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 RNU7-87P-201ENST00000459343 62 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-856P-201ENST00000516959 98 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AC005296.1-201ENST00000616145 209 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AC090574.1-201ENST00000623186 233 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AL359757.2-201ENST00000624309 274 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 AC068205.3-201ENST00000636385 468 ntBASIC2.33□□□□□ -2.04
HERPUD2Q9BSE4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.67-201ENST00000362870 100 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms